Add Python 3.12 to CIs (#147)

* add python 3.12 * add branch trigger * add warning filter * fix * add missing keys * skip onnxruntime test on windows-latest * fix imports --------- Signed-off-by: Adam Li <[email protected]> Co-authored-by: Adam Li <[email protected]>
mne-tools · Mar 9, 2024 · edc561c · edc561c
1 parent 52dd20b
commit edc561c
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Showing 6 changed files with 16 additions and 6 deletions.
diff --git a/.github/workflows/pytest.yaml b/.github/workflows/pytest.yaml
@@ -5,7 +5,7 @@ concurrency:
 on:  # yamllint disable-line rule:truthy
   pull_request:
   push:
-    branches: [main, maint/0.2, maint/0.3, maint/0.4]
+    branches: [main, maint/0.4, maint/0.5, maint/0.6]
   workflow_dispatch:
   schedule:
     - cron: '0 8 * * 1'
@@ -17,7 +17,7 @@ jobs:
       fail-fast: false
       matrix:
         os: [ubuntu, macos, windows]
-        python-version: [3.9, "3.10", "3.11"]
+        python-version: [3.9, "3.10", "3.11", "3.12"]
     name: ${{ matrix.os }} - py${{ matrix.python-version }}
     runs-on: ${{ matrix.os }}-latest
     defaults:

diff --git a/mne_icalabel/conftest.py b/mne_icalabel/conftest.py
@@ -10,6 +10,10 @@ def pytest_configure(config):
     ignore:Setting non-standard config type.*:RuntimeWarning
     # pandas 3.0 will require pyarrow
     ignore:\n*Pyarrow will become a required dependency of pandas.*:DeprecationWarning
+    # Python 3.12+ gives a deprecation warning if TarFile.extraction_filter is None
+    ignore:Python 3\.14 will, by default, filter extracted tar.*:DeprecationWarning
+    # onnxruntime on windows runners
+    ignore:Unsupported Windows version.*:UserWarning
     """
     for warning_line in warnings_lines.split("\n"):
         warning_line = warning_line.strip()

diff --git a/mne_icalabel/iclabel/network/tests/test_network.py b/mne_icalabel/iclabel/network/tests/test_network.py
@@ -1,4 +1,4 @@
-from importlib.resources import files  # type: ignore
+from importlib.resources import files
 
 import numpy as np
 import pytest

diff --git a/mne_icalabel/iclabel/tests/test_label_components.py b/mne_icalabel/iclabel/tests/test_label_components.py
@@ -124,8 +124,9 @@ def test_warnings():
         random_state=101,
     )
     ica.fit(raw)
-    with pytest.warns(RuntimeWarning, match="common average reference"), pytest.warns(
-        RuntimeWarning, match="not filtered between 1 and 100 Hz"
+    with (
+        pytest.warns(RuntimeWarning, match="common average reference"),
+        pytest.warns(RuntimeWarning, match="not filtered between 1 and 100 Hz"),
     ):
         iclabel_label_components(raw, ica)
     with raw.info._unlock():

diff --git a/mne_icalabel/utils/config.py b/mne_icalabel/utils/config.py
@@ -59,9 +59,13 @@ def sys_info(fid: Optional[IO] = None, developer: bool = False):
         keys = (
             "build",
             "doc",
-            "test",
+            "gui",
+            "ica",
+            "onnx",
             "stubs",
             "style",
+            "test",
+            "torch",
         )
         for key in keys:
             extra_dependencies = [

diff --git a/pyproject.toml b/pyproject.toml
@@ -14,6 +14,7 @@ classifiers = [
   'Programming Language :: Python :: 3 :: Only',
   'Programming Language :: Python :: 3.10',
   'Programming Language :: Python :: 3.11',
+  'Programming Language :: Python :: 3.12',
   'Programming Language :: Python :: 3.9',
   'Topic :: Scientific/Engineering',
   'Topic :: Software Development',