Statistical And Functional Fine-mApping of GWAS Risk locI (SAFFARI)

SAFFARI is designed to implement Snakemake and run 4 different fine-mapping methods (SuSiE, FINEMAP, PolyFun+SuSiE, PolyFun+FINEMAP). Please read thoroughly the WiKi page for more details and how to set-up SAFFARI.

Manuscript has been submitted for publication in Nature Neuroscience.

If you end up using this pipeline, please make sure to acknowledge the flagship papers of the softwares implemented:

• PolyFun

• SuSiE

• FINEMAP

• Snakemake

• The current repository (SAFFARI) by citing our preprint.