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SunsetWolf committed Jul 12, 2024
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2 changes: 1 addition & 1 deletion README.md
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Expand Up @@ -32,7 +32,7 @@ In this project, we are aiming to build a Data-Centric R\&D Agent that can

+ Further propose new ideas based on current knowledge and observations.

![Data-Centric R&D Overview](docs/images/overview.png)
![Data-Centric R&D Overview](docs/_static/overview.png)

### 🛣️ Brief Roadmap
In this section, we will briefly introduce the roadmap/technical type of this project.
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20 changes: 20 additions & 0 deletions docs/Makefile
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# Minimal makefile for Sphinx documentation
#

# You can set these variables from the command line, and also
# from the environment for the first two.
SPHINXOPTS ?=
SPHINXBUILD ?= sphinx-build
SOURCEDIR = .
BUILDDIR = build

# Put it first so that "make" without argument is like "make help".
help:
@$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)

.PHONY: help Makefile

# Catch-all target: route all unknown targets to Sphinx using the new
# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS).
%: Makefile
@$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
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286 changes: 286 additions & 0 deletions docs/conf.py
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#
# django cms documentation build configuration file, created by
# sphinx-quickstart on Tue Sep 15 10:47:03 2009.
#
# This file is execfile()d with the current directory set to its containing
# dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out serve
# to show the default.


import importlib.metadata
import datetime
import os
import sys

# Initialize Django for autodoc

sys.path.append(os.path.abspath('./'))

import django

os.environ.setdefault('DJANGO_SETTINGS_MODULE', 'django_settings')
django.setup()



# If extensions (or modules to document with autodoc) are in another
# directory, add these directories to sys.path here. If the directory is
# relative to the documentation root, use os.path.abspath to make it absolute,
# like shown here.

sys.path.append(os.path.abspath('.'))
sys.path.append(os.path.abspath('..'))
sys.path.append(os.path.join(os.path.abspath('.'), '_ext'))

# -- General configuration -----------------------------------------------------

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom ones.
#extensions = ['sphinx.ext.autodoc']

extensions = [
'cms',
'sphinx.ext.autodoc',
'sphinx.ext.autosummary',
'sphinx.ext.doctest',
'sphinx.ext.intersphinx',
'sphinx.ext.todo',
'sphinxcontrib.spelling',
"sphinx_copybutton",
"sphinxext.opengraph",
]
intersphinx_mapping = {
'python': ('https://docs.python.org/3/', None),
'django': ('https://docs.djangoproject.com/en/4.2/', 'https://docs.djangoproject.com/en/4.2/_objects/'),
'classytags': ('https://django-classy-tags.readthedocs.io/en/latest/', None),
'sekizai': ('https://django-sekizai.readthedocs.io/en/latest/', None),
'treebeard': ('https://django-treebeard.readthedocs.io/en/latest/', None),
}

autodoc_member_order = "groupwise"

# Add any paths that contain templates here, relative to this directory.
# templates_path = ['_templates']

# The suffix of source filenames.
source_suffix = '.rst'

# The encoding of source files.
source_encoding = 'utf-8'

# The main toctree document.
master_doc = 'index'

current_year = datetime.datetime.now().year
# General information about the project.
project = 'django cms'
copyright = '2009-{}, django CMS Association and contributors'.format(current_year)

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.

path = os.path.split(os.path.dirname(__file__))[0]
path = os.path.split(path)[0]
sys.path.insert(0, path)

version = importlib.metadata.version("rdagent")
# The full version, including alpha/beta/rc tags.
release = importlib.metadata.version("rdagent")

# The language for content autogenerated by Sphinx. Refer to documentation for
# a list of supported languages.
language = "en"

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = ['build', 'env']

# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
#today = ''
# Else, today_fmt is used as the format for a strftime call.
#today_fmt = '%B %d, %Y'

# List of documents that shouldn't be included in the build.
#unused_docs = []

# List of directories, relative to source directory, that shouldn't be
# searched for source files.
exclude_trees = ['build']

# The reST default role (used for this markup: `text`) to use for all
# documents.
#default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
add_function_parentheses = True

# If true, the current module name will be prepended to all description unit
# titles (such as .. function::).
#add_module_names = True

# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
#show_authors = False

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'

# A list of ignored prefixes for module index sorting.
#modindex_common_prefix = []

todo_include_todos = True


# -- Options for HTML output ---------------------------------------------------

# on_rtd is whether we are on readthedocs.org
on_rtd = os.environ.get('READTHEDOCS', None) == 'True'

try:
import furo

html_theme = 'furo'
html_theme_options = {
"navigation_with_keys": True,
}
except ImportError:
html_theme = 'default'


show_cloud_banner = True

# The theme to use for HTML and HTML Help pages. Major themes that come with
# Sphinx are currently 'default' and 'sphinxdoc'.
# html_theme = 'default'

# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
#html_theme_options = {}

# Add any paths that contain custom themes here, relative to this directory.
#html_theme_path = []

# The name for this set of Sphinx documents. If None, it defaults to
# "<project> v<release> documentation".
#html_title = None

# A shorter title for the navigation bar. Default is the same as html_title.
#html_short_title = None

# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
#html_logo = None

# The name of an image file (within the static path) to use as favicon of the
# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
#html_favicon = None

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']

# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
#html_last_updated_fmt = '%b %d, %Y'

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
#html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
#html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names to
# template names.
#html_additional_pages = {}

# If false, no module index is generated.
#html_use_modindex = True

# If false, no index is generated.
#html_use_index = True

# If true, the index is split into individual pages for each letter.
#html_split_index = False

# If true, links to the reST sources are added to the pages.
#html_show_sourcelink = True

# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
#html_use_opensearch = ''

# If nonempty, this is the file name suffix for HTML files (e.g. ".xhtml").
#html_file_suffix = ''

# Output file base name for HTML help builder.
htmlhelp_basename = 'djangocmsdoc'


# -- Options for LaTeX output --------------------------------------------------

# The paper size ('letter' or 'a4').
latex_paper_size = 'a4'

# The font size ('10pt', '11pt' or '12pt').
#latex_font_size = '10pt'

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title, author, documentclass [howto/manual]).
latex_documents = [
('index', 'djangocms.tex', u'django cms Documentation',
u'django CMS Association and contributors', 'manual'),
]

# The name of an image file (relative to this directory) to place at the top
# of the title page.
#latex_logo = None

# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#latex_use_parts = False

# Additional stuff for the LaTeX preamble.
#latex_preamble = ''

# Documents to append as an appendix to all manuals.
#latex_appendices = []

# If false, no module index is generated.
#latex_use_modindex = True

# -- Options for LaTeX output --------------------------------------------------

# Spelling check needs an additional module that is not installed by default.
# Add it only if spelling check is requested so docs can be generated without it.

# temporarily disabled because of an issue on RTD. see docs/requirements.txt

# if 'spelling' in sys.argv:
# extensions.append("sphinxcontrib.spelling")

# Spelling language.
spelling_lang = 'en_GB'

# Location of word list.
spelling_word_list_filename = 'spelling_wordlist'

spelling_ignore_pypi_package_names = True

#Split common contractions from words so they are not flagged as errors by the spellchecker.
#https://github.com/sphinx-contrib/spelling/blob/master/sphinxcontrib/spelling/filters.py
#See https://sphinxcontrib-spelling.readthedocs.io/en/latest/customize.html#word-filters
spelling_filters=["sphinxcontrib.spelling.filters.ContractionFilter"]
5 changes: 5 additions & 0 deletions docs/developer/demo2.rst
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.. _code_standard:

=============
Code Standard
=============
20 changes: 20 additions & 0 deletions docs/index.rst
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.. RD-Agent documentation master file, created by
sphinx-quickstart on Fri Jul 12 14:32:32 2024.
You can adapt this file completely to your liking, but it should at least
contain the root `toctree` directive.
Welcome to RD-Agent's documentation!
====================================

.. toctree::
:maxdepth: 2
:caption: Contents:



Indices and tables
==================

* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`
35 changes: 35 additions & 0 deletions docs/make.bat
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@ECHO OFF

pushd %~dp0

REM Command file for Sphinx documentation

if "%SPHINXBUILD%" == "" (
set SPHINXBUILD=sphinx-build
)
set SOURCEDIR=source
set BUILDDIR=build

%SPHINXBUILD% >NUL 2>NUL
if errorlevel 9009 (
echo.
echo.The 'sphinx-build' command was not found. Make sure you have Sphinx
echo.installed, then set the SPHINXBUILD environment variable to point
echo.to the full path of the 'sphinx-build' executable. Alternatively you
echo.may add the Sphinx directory to PATH.
echo.
echo.If you don't have Sphinx installed, grab it from
echo.https://www.sphinx-doc.org/
exit /b 1
)

if "%1" == "" goto help

%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%
goto end

:help
%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O%

:end
popd
8 changes: 8 additions & 0 deletions docs/requirements.txt
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sphinx
sphinx_rtd_theme
cms
django
django_settings
django-cms
sphinx-copybutton
sphinxext-opengraph
5 changes: 5 additions & 0 deletions docs/start/demo1.rst
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.. _initialization:

===================
RD-Agent Initialization
===================

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