Skip to content

Commit

Permalink
Pass CRAN checks
Browse files Browse the repository at this point in the history
Updates for check
  • Loading branch information
zzawadz committed Sep 30, 2024
1 parent 68d25b1 commit 6cf838b
Show file tree
Hide file tree
Showing 10 changed files with 14 additions and 19 deletions.
6 changes: 3 additions & 3 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,12 +1,12 @@
Package: FSelectorRcpp
Type: Package
Title: 'Rcpp' Implementation of 'FSelector' Entropy-Based Feature Selection Algorithms with a Sparse Matrix Support
Version: 0.3.11
Version: 0.3.12
Authors@R: c(
person("Zygmunt", "Zawadzki", role = c("aut", "cre"), email = "[email protected]"),
person("Marcin", "Kosinski", role = c("aut"), email = "[email protected]"),
person("Krzysztof", "Slomczynski", role = c("ctb"), email = "[email protected]"),
person("Damian", "Skrzypiec", role = c("ctb"), email = "damian.j.skrzypiec@@gmail.comm"),
person("Damian", "Skrzypiec", role = c("ctb"), email = "damian.j.skrzypiec@gmail.com"),
person(given = "Patrick", family = "Schratz", role = c("ctb"), email = "[email protected]", comment = c(ORCID = "0000-0003-0748-6624"))
)
Description: 'Rcpp' (free of 'Java'/'Weka') implementation of 'FSelector' entropy-based feature selection
Expand Down Expand Up @@ -47,7 +47,7 @@ Suggests:
lintr,
pkgdown,
withr
RoxygenNote: 7.2.3
RoxygenNote: 7.3.2
Encoding: UTF-8
BugReports: https://github.com/mi2-warsaw/FSelectorRcpp/issues
URL: https://github.com/mi2-warsaw/FSelectorRcpp
Expand Down
8 changes: 4 additions & 4 deletions R/information_gain.R
Original file line number Diff line number Diff line change
Expand Up @@ -37,8 +37,8 @@
#'
#' data.frame with the following columns:
#' \itemize{
#' \item{attributes}{ - variables names.}
#' \item{importance}{ - worth of the attributes.}
#' \item attributes - variables names.
#' \item importance - worth of the attributes.
#' }
#'
#' @author Zygmunt Zawadzki \email{[email protected]}
Expand Down Expand Up @@ -124,8 +124,8 @@ information_gain <- function(formula, data, x, y,
#'
#' data.frame with the following columns:
#' \itemize{
#' \item{attributes}{ - variables names.}
#' \item{importance}{ - worth of the attributes.}
#' \item attributes - variables names.
#' \item importance - worth of the attributes.
#' }
#'
#' @export
Expand Down
1 change: 0 additions & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,6 @@ If something is missing or not clear - please chat with us on our [slack](https:

### Blog posts history with use cases

- [Entropy Based Image Binarization with imager and FSelectorRcpp, Marcin Kosiński](http://r-addict.com/2017/01/08/Entropy-Based-Image-Binarization.html)
- [Venn Diagram Comparison of Boruta, FSelectorRcpp and GLMnet Algorithms, Marcin Kosiński](https://www.r-bloggers.com/2016/06/venn-diagram-comparison-of-boruta-fselectorrcpp-and-glmnet-algorithms/)

![Orly cover](man/figures/o_rly.png)
4 changes: 2 additions & 2 deletions man/dot-information_gain.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

4 changes: 2 additions & 2 deletions man/information_gain.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

4 changes: 1 addition & 3 deletions vignettes/benchmarks_discretize.Rmd
Original file line number Diff line number Diff line change
@@ -1,6 +1,5 @@
---
title: "Benchmarks: discretize()"
subtitle: "<small>[Marcin Kosinski](http://r-addict.com/About.html)&nbsp;&nbsp;<a href='https://stackoverflow.com/users/3857701'><i class='fa fa-stack-overflow'></i></a>&nbsp;&nbsp;<a href='http://r-addict.com'><i class='fa fa-comment'></i></a>&nbsp;&nbsp;<a href='https://github.com/MarcinKosinski'><i class='fa fa-github'></i></a>&nbsp;&nbsp;<a href='mailto:[email protected]'><i class='fa fa-envelope-o'></i></a><br>Krzysztof Slomczynski&nbsp;&nbsp;<a href='https://github.com/krzyslom'><i class='fa fa-github'></i></a>&nbsp;&nbsp;<a href='mailto:[email protected]'><i class='fa fa-envelope-o'></i></a></small><br>"
output:
rmarkdown::html_vignette:
mathjax: default
Expand All @@ -11,7 +10,7 @@ output:
bibliography: RJreferences.bib
vignette: >
%\VignetteEngine{knitr::rmarkdown}
%\VignetteIndexEntry{Microbenchmarks of FSelectoRcpp and FSelector - discretization}
%\VignetteIndexEntry{Benchmarks: discretize()}
---

```{r, echo=FALSE, message=TRUE, results='asis'}
Expand Down Expand Up @@ -110,7 +109,6 @@ names(BRCA.rnaseq) <- gsub(pattern = "[[:punct:]]", replacement = "_",

## More

- [RTCGA Quick Guide](http://r-addict.com/2016/05/04/RTCGA-Quick-Guide.html)
- [RTCGA Website](https://rtcga.github.io/RTCGA/)

# Discretization Benchmarks
Expand Down
Binary file not shown.
Binary file not shown.
4 changes: 1 addition & 3 deletions vignettes/get_started.Rmd
Original file line number Diff line number Diff line change
@@ -1,6 +1,5 @@
---
title: "Motivation, Installation and Quick Workflow"
subtitle: "<small> [Marcin Kosinski](http://r-addict.com/About.html) &nbsp;&nbsp;<a href='https://stackoverflow.com/users/3857701'><i class='fa fa-stack-overflow'></i></a>&nbsp;&nbsp;<a href='http://r-addict.com'><i class='fa fa-comment'></i></a>&nbsp;&nbsp;<a href='https://github.com/MarcinKosinski'><i class='fa fa-github'></i></a>&nbsp;&nbsp;<a href='mailto:[email protected]'><i class='fa fa-envelope-o'></i></a> <br> [Zygmunt Zawadzki](https://www.zstat.pl/) &nbsp;&nbsp;<a href='https://www.zstat.pl/'><i class='fa fa-comment'></i></a>&nbsp;&nbsp;<a href='https://github.com/zzawadz'><i class='fa fa-github'></i></a>&nbsp;&nbsp;<a href='mailto:[email protected]'><i class='fa fa-envelope-o'></i></a></small><br>"
output:
rmarkdown::html_vignette:
mathjax: default
Expand All @@ -11,7 +10,7 @@ output:
bibliography: RJreferences.bib
vignette: >
%\VignetteEngine{knitr::rmarkdown}
%\VignetteIndexEntry{Get started: Motivation, Installation and Quick Workflow}
%\VignetteIndexEntry{Motivation, Installation and Quick Workflow}
---

```{r setup, include = FALSE}
Expand Down Expand Up @@ -116,7 +115,6 @@ feature_search( # feature_search work in 2 modes - 'exhaustive' and 'gr

## Use cases

- [Entropy Based Image Binarization with imager and FSelectorRcpp](http://r-addict.com/2017/01/08/Entropy-Based-Image-Binarization.html)
- [Venn Diagram Comparison of Boruta, FSelectorRcpp and GLMnet Algorithms](https://www.r-bloggers.com/2016/06/venn-diagram-comparison-of-boruta-fselectorrcpp-and-glmnet-algorithms/)

# References
2 changes: 1 addition & 1 deletion vignettes/integer-variables.Rmd
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
---
title: "Integer variables."
title: "Integer variables"
author: "Zygmunt Zawadzki"
date: "`r Sys.Date()`"
output: rmarkdown::html_vignette
Expand Down

0 comments on commit 6cf838b

Please sign in to comment.