Merge branch 'master' of github.com:mhhennig/HS2

mhhennig · Jul 19, 2024 · 2f453ca · 2f453ca
2 parents 85685ef + 6ca1c8d
commit 2f453ca
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Showing 2 changed files with 14 additions and 20 deletions.
diff --git a/herdingspikes/detection_lightning/Detection.cpp b/herdingspikes/detection_lightning/Detection.cpp
@@ -1,6 +1,6 @@
 #include <algorithm>
 #include <numeric>
-#include <iostream>
+
 #include <omp.h>
 
 #include "Detection.h"
@@ -21,10 +21,8 @@ namespace HSDetection
         : traceRaw(chunkLeftMargin, numChannels, chunkSize),
           numChannels(numChannels), alignedChannels(alignChannel(numChannels)),
           chunkSize(chunkSize), chunkLeftMargin(chunkLeftMargin), rescale(rescale),
-        //   scale(new FloatRaw[alignedChannels * channelAlign]),
-        //   offset(new FloatRaw[alignedChannels * channelAlign]),
-          scale((FloatRaw *)operator new[](sizeof(FloatRaw) * alignedChannels * channelAlign, (std::align_val_t(channelAlign * sizeof(IntVolt))))),
-          offset((FloatRaw *)operator new[](sizeof(FloatRaw) * alignedChannels * channelAlign, (std::align_val_t(channelAlign * sizeof(IntVolt))))),
+          scale((FloatRaw *) operator new[](sizeof(FloatRaw) * alignedChannels * channelAlign, (std::align_val_t(channelAlign * sizeof(IntVolt))))),
+          offset((FloatRaw *) operator new[](sizeof(FloatRaw) * alignedChannels * channelAlign, (std::align_val_t(channelAlign * sizeof(IntVolt))))),
           trace(chunkSize + chunkLeftMargin, alignedChannels * channelAlign),
           medianReference(medianReference), averageReference(averageReference),
           commonRef(chunkSize + chunkLeftMargin, 1),
@@ -64,8 +62,8 @@ namespace HSDetection
         delete[] spikeArea;
         delete[] hasAHP;
 
-        operator delete[](scale, std::align_val_t(channelAlign * sizeof(IntVolt)));
-        operator delete[](offset, std::align_val_t(channelAlign * sizeof(IntVolt)));
+        operator delete[](scale, align_val_t(channelAlign * sizeof(IntVolt)));
+        operator delete[](offset, align_val_t(channelAlign * sizeof(IntVolt)));
     }
 
     void Detection::step(FloatRaw *traceBuffer, IntFrame chunkStart, IntFrame chunkLen)
@@ -208,13 +206,13 @@ namespace HSDetection
         for (IntFrame t = chunkStart; t < chunkStart + chunkLen; t++)
         {
             estimation(runningBaseline[t], runningDeviation[t],
-                        trace[t], commonRef[t],
-                        runningBaseline[t - 1], runningDeviation[t - 1],
-                        thAlignedStart, thAlignedEnd);
+                       trace[t], commonRef[t],
+                       runningBaseline[t - 1], runningDeviation[t - 1],
+                       thAlignedStart, thAlignedEnd);
 
             detection(trace[t], commonRef[t],
-                        runningBaseline[t], runningDeviation[t],
-                        thAlignedStart * channelAlign, thActualEnd, t);
+                      runningBaseline[t], runningDeviation[t],
+                      thAlignedStart * channelAlign, thActualEnd, t);
         }
     }
 

diff --git a/herdingspikes/detection_lightning/RollingArray.h b/herdingspikes/detection_lightning/RollingArray.h
@@ -32,18 +32,14 @@ namespace HSDetection
         // {
         //     arrayBuffer = new (memAlign) IntVolt[(IntCalc)(frameMask + 1) * numChannels];
         // }
-        // ~RollingArray() { operator delete[](arrayBuffer, memAlign); }
-        // RollingArray(IntFrame rollingLen, IntChannel numChannels)
-        //     : frameMask(getMask(rollingLen)), numChannels(numChannels)
-        // {
-        //     arrayBuffer = new IntVolt[(IntCalc)(frameMask + 1) * numChannels];
-        // }
         RollingArray(IntFrame rollingLen, IntChannel numChannels)
             : frameMask(getMask(rollingLen)), numChannels(numChannels)
         {
-            arrayBuffer = (IntVolt *)operator new[](sizeof(IntVolt) * (IntCalc)(frameMask + 1) * numChannels, memAlign);
+            // std::cout << "Rollingarray\n";
+            arrayBuffer = (IntVolt *) operator new[](sizeof(IntVolt) * (IntCalc)(frameMask + 1) * numChannels,memAlign);
         }
-        ~RollingArray() { delete[] arrayBuffer; }
+
+        ~RollingArray() { operator delete[](arrayBuffer, memAlign); }
 
         // copy constructor deleted to protect buffer
         RollingArray(const RollingArray &) = delete;