NOTE: Do not use this repository, please goto CSHL labshare, uncompressed formats instead. This repository (tetoolkit-test-data) is for backup only.
For use with TEtranscripts
Github ultra compressed version of data needed for TEtranscripts
This repository constitutes all that is required in test and sample data for TEToolkit, this data can be found on the CSHL labshare in uncompressed formats. in order to use data from this repository you will need the xz compression tool and either samtools or cramtools to convert from cram to bam.