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New release (v1.3.9)
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mgalardini committed Jun 25, 2021
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7 changes: 5 additions & 2 deletions CHANGELOG.md
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# CHANGELOG
v1.3.8 (May 2020)
v1.3.9 (June 2021)
- Bugfix: avoid a crash when providing lineages in whole genome mode

v1.3.8 (May 2021)
- Improvement: fall back to Firth regression when encountering a matrix inversion error (thanks to Julian Libiseller-Egger)
- Bugfix: check for zero passing variants in read_all (enet, thanks to Julian Libiseller-Egger)
- Bugfix: use len(all_strains) instead of len(sample_order) to determine shape of sparse matrix in load_all_vars (enet, thanks to Julian Libiseller-Egger)
- Bugfix: properly report all filtered variants
- Bugfix: --lmm requires either --similarity or a LMM cache

v1.3.7 (May 2020)
v1.3.7 (May 2021)
- Enhancement: check that provided phenotypes are of numeric type
- Bugfix: properly report all filtered variants
- Bugfix: don't crash if regression fails for missing data
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4 changes: 2 additions & 2 deletions docs/conf.py
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# built documents.
#
# The short X.Y version.
version = '1.3.8'
version = '1.3.9'
# The full version, including alpha/beta/rc tags.
release = '1.3.7'
release = '1.3.9'

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
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