fix: all green

README.md

@@ -151,7 +151,6 @@ Run the tests in the repository through the deno task:
 
 ```bash
 $ deno task test
+# this supports filtering
+$ deno task test --filter envHooks
 ```
-
-Most tests are isolated from each other using containers. 
-Set `$GHJK_TEST_E2E_TYPE` to `local` to use the local test runner.

modules/ports/mod.ts

@@ -142,7 +142,7 @@ export class PortsModule extends ModuleBase<PortsLockEnt> {
             updateInstall: {
               short: "u",
               long: "update-install",
-              value_name: "INSTALL_ID",
+              value_name: "INSTALL ID",
             },
             updateAll: {
               short: "a",
@@ -157,7 +157,7 @@ export class PortsModule extends ModuleBase<PortsLockEnt> {
               gcx,
               pcx,
               updateInstall as string | undefined,
-              updateAll as string | undefined,
+              updateAll as boolean | undefined,
             );
           },
         },
@@ -203,7 +203,7 @@ async function outdatedCommand(
   gcx: GhjkCtx,
   pcx: PortsCtx,
   updateInstallFlag?: string,
-  updateAllFlag?: string,
+  updateAllFlag?: boolean,
 ) {
   const envsCtx = getEnvsCtx(gcx);
   const envName = envsCtx.activeEnv;

src/deno_systems/types.ts

@@ -80,7 +80,8 @@ const flagsAndArgs = zod.record(
   zod.union([
     zod.string(),
     zod.string().array(),
-    zod.string().array().array(),
+    zod.number(),
+    zod.boolean(),
   ]).optional(),
 );
 
@@ -114,13 +115,6 @@ export type DenoSystemsRoot = {
   systems: Record<string, DenoSystemCtor>;
 };
 
-export type CommandAction = (
-  args: {
-    flags: Record<string, string | undefined>;
-    args: Record<string, string | undefined>;
-  },
-) => Promise<void> | void;
-
 export type CliCommand = zod.input<typeof cliCommandActionBase> & {
   sub_commands?: CliCommand[];
 };

src/ghjk/host/hashfile.rs

@@ -135,7 +135,7 @@ async fn file_digests(
             .into_iter()
             .map(|path| {
                 async move {
-                    let path = tokio::fs::canonicalize(path).await?;
+                    let path = std::path::absolute(path)?;
                     let hash = file_digest_hash(hcx, &path).await?;
                     let relative_path = pathdiff::diff_paths(path, &hcx.config.cwd).unwrap();
                     Ok((relative_path, hash))

src/ghjk/systems/deno.rs

@@ -294,7 +294,7 @@ impl SystemInstance for DenoSystemInstance {
 
         let cmds = cmds
             .into_iter()
-            .map(|cmd| cmd.into_clap(self.scx.clone()))
+            .map(|cmd| cmd.convert(self.scx.clone()))
             .collect();
 
         Ok(cmds)