To run use after cloning this folder use:
cookiecutter path/to/cloned/folder/cookiecutter-dna-gatk-variant-calling
Fill the data and it will generate the code. This is build to work under HKUST's biocrfhpc2 system. Code in this repo is not only adapted from that of the authors of the snakemake-workflow/coookiecutter-dna-gatk-variant-calling and from the cookiecutter code from Chris Preusch(cpreusch). More information from the snakemake workflow data included in the README file inside the cookiecutter template folder.