rmatt

Install the package using the following command:

devtools::install_github("mattmuller0/rmatt")

General Functions

• general_functions.R: General functions
• plotting_functions.R: Functions for plotting (mainly ggplot2)
• utils.R: Utility functions
• exports.R: Exports of some common functions from other packages

Omics Functions

• converting_functions.R: Functions for converting data and annotations
• filtering_functions.R: Functions for filtering rna-seq data
• rna_functions.R: Functions for RNA analysis
• proteomics_functions.R: Functions for proteomics analysis (targeted proteomics mainly)
• phenomics_functions.R: Functions for biobank phenomics analysis
• enrichment_functions.R: Functions for enrichment analysis
• signature_functions.R: Functions for -omics signature analysis

Stats Functions

• stats_functions.R: Functions for statistics and survival analysis
• clustering_functions.R: Functions for clustering analysis
• survival_functions.R: Functions for survival analysis