Skip to content

Merge branch 'bids-standard:master' into master #66

Merge branch 'bids-standard:master' into master

Merge branch 'bids-standard:master' into master #66

Workflow file for this run

name: "schemacode_ci"
on:
push:
branches:
- "master"
tags:
- "schema-*"
pull_request:
branches:
- "*"
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true
defaults:
run:
shell: bash
jobs:
build:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: ["ubuntu-latest"]
python-version: ["3.11"]
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: "Install build dependencies"
run: pip install --upgrade build twine
- name: "Install test dependencies on tag"
run: pip install --upgrade tools/schemacode[tests]
if: ${{ startsWith(github.ref, 'refs/tags/schema-') }}
- name: "Build archive on tag"
run: pytest tools/schemacode/bidsschematools -k make_archive
env:
BIDSSCHEMATOOLS_RELEASE: 1
if: ${{ startsWith(github.ref, 'refs/tags/schema-') }}
- name: "Build source distribution and wheel"
run: python -m build tools/schemacode
- name: "Check distribution metadata"
run: twine check tools/schemacode/dist/*
- uses: actions/upload-artifact@v4
with:
name: dist
path: tools/schemacode/dist/
test:
runs-on: ${{ matrix.os }}
needs: [build]
strategy:
fail-fast: false
matrix:
os: ["ubuntu-latest"]
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
include:
- os: macos-latest
python-version: 3
- os: windows-latest
python-version: 3
name: ${{ matrix.os }} with Python ${{ matrix.python-version }}
steps:
- uses: actions/checkout@v4
- name: "Set up Python"
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
allow-prereleases: true
- name: "Display Python version"
run: python -c "import sys; print(sys.version)"
- name: "Fetch packages"
uses: actions/download-artifact@v4
with:
name: dist
path: dist/
- name: "Install package"
run: |
pip install $( ls dist/*.whl )[all]
- name: "Run tests"
run: |
python -m pytest -vs --pyargs bidsschematools -m "not validate_schema" \
--cov-append --cov-report=xml --cov=bidsschematools --doctest-modules
- name: Upload artifacts
uses: actions/upload-artifact@v4
with:
name: unit_${{ matrix.os }}_${{ matrix.python-version }}
path: coverage.xml
if: success()
publish:
runs-on: ${{ matrix.os }}
name: Publish Python Package
needs: [test]
if: github.event_name == 'push'
strategy:
matrix:
os: ["ubuntu-latest"]
python-version: ["3.11"]
steps:
- name: "Fetch packages"
uses: actions/download-artifact@v4
with:
name: dist
path: dist/
- name: "Test PyPI upload"
uses: pypa/gh-action-pypi-publish@release/v1
with:
user: __token__
password: ${{ secrets.TEST_PYPI_API_TOKEN }}
repository-url: https://test.pypi.org/legacy/
skip-existing: true
- name: "Upload to PyPI (on tags)"
if: startsWith(github.ref, 'refs/tags/schema-')
uses: pypa/gh-action-pypi-publish@release/v1
with:
user: __token__
password: ${{ secrets.PYPI_API_TOKEN }}
validate_schema:
runs-on: ubuntu-latest
name: Validate schema
steps:
- uses: actions/checkout@v4
- name: Set Up Python environment
uses: actions/setup-python@v5
with:
python-version: "3.11"
- name: Install the schemacode package
run: |
python -m pip install --progress-bar off --upgrade pip setuptools wheel
python -m pip install -e ./tools/schemacode[all]
- name: Run schema validation tests
run: python -m pytest --pyargs bidsschematools -m "validate_schema" --cov-append --cov-report=xml --cov=bidsschematools
- name: Upload artifacts
uses: actions/upload-artifact@v4
with:
name: schema_validation
path: coverage.xml
if: success()
upload_to_codecov:
runs-on: "ubuntu-latest"
name: Upload coverage
needs: [test, validate_schema]
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Download artifacts
uses: actions/download-artifact@v4
- name: Upload to CodeCov
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }} # not required but might help API rate limits
fail_ci_if_error: true