maybe fixed pytest workflow

tests/interface/test_editEvent.py

@@ -0,0 +1,54 @@
+import pytest
+
+import mapmanagercore.data
+
+from pymapmanager.interface2 import PyMapManagerApp
+from pymapmanager.interface2.stackWidgets import stackWidget2
+from pymapmanager.interface2.stackWidgets.event.spineEvent import EditSpinePropertyEvent, DeleteSpineEvent
+from pymapmanager._logger import logger
+
+# this makes qapp be our PyMapManagerApp, it is derived from QApplication
+@pytest.fixture(scope="session")
+def qapp_cls():
+    return PyMapManagerApp
+
+@pytest.fixture
+def stackWidgetObject(qtbot, qapp):
+	# path = '../PyMapManager-Data/maps/rr30a/rr30a_s0_ch2.tif'
+    path = mapmanagercore.data.getSingleTimepointMap()
+    sw = stackWidget2(path=path)
+
+	# sw.showScatterPlot2(show=True)
+	# sw.showAnalysisParams()
+
+    return sw
+
+def test_deleteSpine(stackWidgetObject, qapp):
+    spineID = 2
+    dse = DeleteSpineEvent(stackWidgetObject, spineID=spineID)
+
+def test_editSpineProperty(stackWidgetObject, qapp):
+    logger.info('')
+
+    assert stackWidgetObject is not None
+    assert isinstance(stackWidgetObject, stackWidget2)
+
+    # path = '../PyMapManager-Data/maps/rr30a/rr30a_s0_ch2.tif'
+    # sw = stackWidget2(path=path)
+
+    spineID = 2
+    col = 'userType'
+    value = 12
+
+    esp = EditSpinePropertyEvent(stackWidgetObject, spineID=spineID, col=col, value=value)
+
+    spineID = 5
+    col = 'accept'
+    value = True  # str, int, float
+    esp.addEdit(spineID, col, value)
+
+    for idx, oneEdit in enumerate(esp):
+        print('   ', idx, oneEdit)
+
+    # print('getList:', esp.getList())
+

tests/interface/test_stack_widgets.py

@@ -0,0 +1,59 @@
+import os
+import sys
+import pytest
+
+import mapmanagercore.data
+
+from pymapmanager.interface2.pyMapManagerApp2 import PyMapManagerApp
+from pymapmanager.interface2.stackWidgets import stackWidget2
+
+from pymapmanager._logger import logger
+
+# this makes qapp be our PyMapManagerApp, it is derived from QApplication
+@pytest.fixture(scope="session")
+def qapp_cls():
+    return PyMapManagerApp
+
+# def test_stack_plugins():
+#     # logger.info(f'calling pyMapManagerApp.loadPlugins()')
+
+#     app = PyMapManagerApp()
+
+#     _stack = app.getStackPluginDict()
+#     _map = app.getMapPluginDict()
+
+#     # for k,v in pluginDict.items():
+#     #     logger.info(k)
+#     #     # logger.info(v)
+#     #     for k2, v2 in v.items():
+#     #         logger.info(f'  {k2}: {v2}')
+
+def test_plugins(qtbot, qapp):
+    """Run all plugins through a number of different tests.
+    """
+
+    print('qapp:', qapp)
+
+    mmapPath = mapmanagercore.data.getSingleTimepointMap()
+
+    logger.info(f'opening stack widget path {mmapPath}')
+    stackWidgetWindow = stackWidget2(path=mmapPath)
+
+    # get list of all stack widgets from app, keys are class of plugin
+    stackPluginDict = qapp.getStackPluginDict()
+
+    for pluginName, _dict in stackPluginDict.items():
+        # if pluginName in ['Point List', 'Line List', 'Histogram', 'Search Widget', 'Selection Widget']:
+        #     stackWidgetWindow.runPlugin(pluginName)
+
+        if pluginName in ['Stack Widget', 'line plot', 'point plot', 'not assigned']:
+            # stack widget is special
+            continue
+
+        logger.info(f'running plugin: {pluginName}')
+        stackWidgetWindow.runPlugin(pluginName)
+
+        stackWidgetWindow.zoomToPointAnnotation(5)
+
+if __name__ == '__main__':
+    pass