corrected values for default DP4

lskatz · Jan 29, 2016 · 34468aa · 34468aa
1 parent 8c72ce8
commit 34468aa
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/scripts/set_fixVcf.pl b/scripts/set_fixVcf.pl
@@ -354,6 +354,7 @@ sub fixVcfLine{
         $y{gtypes}{$samplename}{DP4}=$y{INFO}{DP4};
         delete($y{INFO}{DP4});
       } 
+      $y{gtypes}{$samplename}{DP4}||=join(",",qw(. . . .));
       # If it wasn't defined before, set it up
       $y{gtypes}{$samplename}{DP4}=join(",",
         $y{gtypes}{$samplename}{RDF},