11 test(s) failed, 209 test(s) collected.

Bash exited with code '1'.

11 test(s) failed, 209 test(s) collected.

Cmd.exe exited with code '1'.

mapper = UMAP(n_epochs=100, tqdm_kwds={'bar_format': '{desc}: {percentage:3.0f}%| {bar} {n_fmt}/{total_fmt} [{elapsed}]', 'desc': 'Epochs completed', 'disable': True})
iris = {'data': array([[5.1, 3.5, 1.4, 0.2],
       [4.9, 3. , 1.4, 0.2],
       [4.7, 3.2, 1.3, 0.2],
       [4.6, 3.1, 1.5,... width (cm)', 'petal length (cm)', 'petal width (cm)'], 'filename': 'iris.csv', 'data_module': 'sklearn.datasets.data'}
iris_selection = array([ True,  True,  True,  True, False,  True, False,  True,  True,
       False, False, False, False,  True,  True,...       False,  True,  True, False,  True,  True, False,  True,  True,
        True,  True,  True, False,  True,  True])

    @plot_only
    def test_plot_runs_at_all(mapper, iris, iris_selection):
        from umap import plot as umap_plot
    
        umap_plot.points(mapper)
        umap_plot.points(mapper, labels=iris.target)
        umap_plot.points(mapper, values=iris.data[:, 0])
        umap_plot.points(mapper, labels=iris.target, subset_points=iris_selection)
        umap_plot.points(mapper, values=iris.data[:, 0], subset_points=iris_selection)
        umap_plot.points(mapper, theme="fire")
>       umap_plot.diagnostic(mapper, diagnostic_type="all")

umap/tests/test_plot.py:37: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
umap/plot.py:1202: in diagnostic
    diagnostic(
umap/plot.py:1124: in diagnostic
    accuracy = _nhood_compare(
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/numba/core/dispatcher.py:468: in _compile_for_args
    error_rewrite(e, 'typing')
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

e = TypingError('Failed in nopython mode pipeline (step: nopython frontend)\nNo implementation of function Function(<funct...(indices_left.shape[0]):\n        intersection_size = np.intersect1d(indices_left[i], indices_right[i], \n        ^\n')
issue_type = 'typing'

    def error_rewrite(e, issue_type):
        """
        Rewrite and raise Exception `e` with help supplied based on the
        specified issue_type.
        """
        if config.SHOW_HELP:
            help_msg = errors.error_extras[issue_type]
            e.patch_message('\n'.join((str(e).rstrip(), help_msg)))
        if config.FULL_TRACEBACKS:
            raise e
        else:
>           raise e.with_traceback(None)
E           numba.core.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
E           No implementation of function Function(<function intersect1d at 0x7fc553f87a30>) found for signature:
E            
E            >>> intersect1d(array(int32, 1d, C), array(int32, 1d, C), assume_unique=Literal[bool](True))
E            
E           There are 2 candidate implementations:
E             - Of which 2 did not match due to:
E             Overload in function 'jit_np_intersect1d': File: numba/np/arraymath.py: Line 3586.
E               With argument(s): '(array(int32, 1d, C), array(int32, 1d, C), assume_unique=bool)':
E              Rejected as the implementation raised a specific error:
E                TypingError: got an unexpected keyword argument 'assume_unique'
E             raised from /opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/numba/core/typing/templates.py:784
E           
E           During: resolving callee type: Function(<function intersect1d at 0x7fc553f87a30>)
E           During: typing of call at /home/vsts/work/1/s/umap/plot.py (209)
E           
E           
E           File "umap/plot.py", line 209:
E           def _nhood_compare(indices_left, indices_right):
E               <source elided>
E               for i in range(indices_left.shape[0]):
E                   intersection_size = np.intersect1d(indices_left[i], indices_right[i], 
E                   ^

/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/numba/core/dispatcher.py:409: TypingError

num_isolates = 1, metric = 'jaccard', force_approximation = True

    @pytest.mark.parametrize("num_isolates", [1, 5])
    @pytest.mark.parametrize("metric", ["jaccard", "hellinger"])
    @pytest.mark.parametrize("force_approximation", [True, False])
    def test_disconnected_data(num_isolates, metric, force_approximation):
        options = [False, True]
        disconnected_data = np.random.choice(a=options, size=(10, 30), p=[0.6, 1 - 0.6])
        # Add some disconnected data for the corner case test
        disconnected_data = np.vstack(
            [disconnected_data, np.zeros((num_isolates, 30), dtype="bool")]
        )
        new_columns = np.zeros((num_isolates + 10, num_isolates), dtype="bool")
        for i in range(num_isolates):
            new_columns[10 + i, i] = True
        disconnected_data = np.hstack([disconnected_data, new_columns])
    
>       with pytest.warns(None) as w:

umap/tests/test_umap_ops.py:119: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = WarningsChecker(record=True), expected_warning = None, match_expr = None

    def __init__(
        self,
        expected_warning: Optional[
            Union[Type[Warning], Tuple[Type[Warning], ...]]
        ] = Warning,
        match_expr: Optional[Union[str, Pattern[str]]] = None,
        *,
        _ispytest: bool = False,
    ) -> None:
        check_ispytest(_ispytest)
        super().__init__(_ispytest=True)
    
        msg = "exceptions must be derived from Warning, not %s"
        if expected_warning is None:
>           warnings.warn(WARNS_NONE_ARG, stacklevel=4)
E           pytest.PytestRemovedIn8Warning: Passing None has been deprecated.
E           See https://docs.pytest.org/en/latest/how-to/capture-warnings.html#additional-use-cases-of-warnings-in-tests for alternatives in common use cases.

/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/recwarn.py:279: PytestRemovedIn8Warning

num_isolates = 5, metric = 'jaccard', force_approximation = True

    @pytest.mark.parametrize("num_isolates", [1, 5])
    @pytest.mark.parametrize("metric", ["jaccard", "hellinger"])
    @pytest.mark.parametrize("force_approximation", [True, False])
    def test_disconnected_data(num_isolates, metric, force_approximation):
        options = [False, True]
        disconnected_data = np.random.choice(a=options, size=(10, 30), p=[0.6, 1 - 0.6])
        # Add some disconnected data for the corner case test
        disconnected_data = np.vstack(
            [disconnected_data, np.zeros((num_isolates, 30), dtype="bool")]
        )
        new_columns = np.zeros((num_isolates + 10, num_isolates), dtype="bool")
        for i in range(num_isolates):
            new_columns[10 + i, i] = True
        disconnected_data = np.hstack([disconnected_data, new_columns])
    
>       with pytest.warns(None) as w:

umap/tests/test_umap_ops.py:119: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/recwarn.py:279: in __init__
    warnings.warn(WARNS_NONE_ARG, stacklevel=4)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:345: in from_call
    result: Optional[TResult] = func()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:266: in <lambda>
    lambda: ihook(item=item, **kwds), when=when, reraise=reraise
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_hooks.py:501: in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_manager.py:119: in _hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/threadexception.py:87: in pytest_runtest_call
    yield from thread_exception_runtest_hook()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/threadexception.py:63: in thread_exception_runtest_hook
    yield
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/unraisableexception.py:90: in pytest_runtest_call
    yield from unraisable_exception_runtest_hook()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/unraisableexception.py:65: in unraisable_exception_runtest_hook
    yield
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/logging.py:839: in pytest_runtest_call
    yield from self._runtest_for(item, "call")
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/logging.py:822: in _runtest_for
    yield
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/capture.py:882: in pytest_runtest_call
    return (yield)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/skipping.py:257: in pytest_runtest_call
    return (yield)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:181: in pytest_runtest_call
    raise e
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:173: in pytest_runtest_call
    item.runtest()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/python.py:1836: in runtest
    self.ihook.pytest_pyfunc_call(pyfuncitem=self)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_hooks.py:501: in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_manager.py:119: in _hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/python.py:193: in pytest_pyfunc_call
    result = testfunction(**testargs)
umap/test

num_isolates = 1, metric = 'hellinger', force_approximation = True

    @pytest.mark.parametrize("num_isolates", [1, 5])
    @pytest.mark.parametrize("metric", ["jaccard", "hellinger"])
    @pytest.mark.parametrize("force_approximation", [True, False])
    def test_disconnected_data(num_isolates, metric, force_approximation):
        options = [False, True]
        disconnected_data = np.random.choice(a=options, size=(10, 30), p=[0.6, 1 - 0.6])
        # Add some disconnected data for the corner case test
        disconnected_data = np.vstack(
            [disconnected_data, np.zeros((num_isolates, 30), dtype="bool")]
        )
        new_columns = np.zeros((num_isolates + 10, num_isolates), dtype="bool")
        for i in range(num_isolates):
            new_columns[10 + i, i] = True
        disconnected_data = np.hstack([disconnected_data, new_columns])
    
>       with pytest.warns(None) as w:

umap/tests/test_umap_ops.py:119: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/recwarn.py:279: in __init__
    warnings.warn(WARNS_NONE_ARG, stacklevel=4)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:345: in from_call
    result: Optional[TResult] = func()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:266: in <lambda>
    lambda: ihook(item=item, **kwds), when=when, reraise=reraise
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_hooks.py:501: in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_manager.py:119: in _hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/threadexception.py:87: in pytest_runtest_call
    yield from thread_exception_runtest_hook()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/threadexception.py:63: in thread_exception_runtest_hook
    yield
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/unraisableexception.py:90: in pytest_runtest_call
    yield from unraisable_exception_runtest_hook()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/unraisableexception.py:65: in unraisable_exception_runtest_hook
    yield
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/logging.py:839: in pytest_runtest_call
    yield from self._runtest_for(item, "call")
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/logging.py:822: in _runtest_for
    yield
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/capture.py:882: in pytest_runtest_call
    return (yield)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/skipping.py:257: in pytest_runtest_call
    return (yield)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:181: in pytest_runtest_call
    raise e
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/runner.py:173: in pytest_runtest_call
    item.runtest()
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/python.py:1836: in runtest
    self.ihook.pytest_pyfunc_call(pyfuncitem=self)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_hooks.py:501: in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/pluggy/_manager.py:119: in _hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
/opt/hostedtoolcache/Python/3.10.13/x64/lib/python3.10/site-packages/_pytest/python.py:193: in pytest_pyfunc_call
    result = testfunction(**testargs)
umap/te