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# Analysis of ecologically relevant sea ice and ocean variables for the Southern Ocean using a high-resolution model to inform ecosystem studies
This repository contains all material necessary to reproduce the figures and summary statistics presented in the publication *Analysis of ecologically relevant sea ice and ocean variables for the Southern Ocean using a high-resolution model to inform ecosystem studies* by [Denisse Fierro-Arcos](https://github.com/lidefi87), Stuart Corney, Amelie Meyer, [Hakase Hayashida](https://github.com/hakaseh), [Andrew E. Kiss](https://github.com/aekiss) and Petra Heil. This manuscript has been submitted for publication to *Progress in Oceanography* and it is currently under review.
This repository contains all material necessary to reproduce the figures and summary statistics presented in the publication *Analysis of ecologically relevant sea ice and ocean variables for the Southern Ocean using a high-resolution model to inform ecosystem studies* by [Denisse Fierro-Arcos](https://github.com/lidefi87), [Stuart Corney](https://www.utas.edu.au/profiles/staff/imas/stuart-corney), [Amelie Meyer](https://www.utas.edu.au/profiles/staff/imas/amelie-meyer), [Hakase Hayashida](https://github.com/hakaseh), [Andrew E. Kiss](https://github.com/aekiss) and [Petra Heil](https://www.antarctica.gov.au/science/meet-our-scientists/dr-petra-heil/). This manuscript has been submitted for publication to *Progress in Oceanography* and it is currently under review.

In this study we examined the suitability of using outputs from the second run of [ACCESS-OM2-01](https://cosima.org.au/index.php/2020/07/29/data-available-0-1-1958-2018-access-om2-iaf-run/), a high-resolution coupled ocean-sea ice model, to answer questions about ecological impacts in the Southern Ocean. These notebooks can be used as a template for testing the suitability of model outputs for ecological applications, as well as quantitative estimates of changes in key environmental variables for the Southern Ocean over the past 50 years. The [Marine Ecosystem Assessment for the Southern Ocean (MEASO) regions](https://sokiaq.atlassian.net/wiki/spaces/MEASO/pages/4348444548/MEASO+Approach+Structure+Format) were used to evaluate and quantify the rate of change in the physical environment of the Southern Ocean. These regions were designed to establish a standard spatial scale for reporting and assessing environmental and ecosystem change in the SO, and to facilitate comparisons across studies and throughout time.

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Given that the ACCESS-OM2-01 outputs are only available through GADI, the notebooks will only run in there. Ensure you have access to a project in GADI that has computational allocation to be able to run them without any issues. All notebooks in this repository have been developed using the `Analysis3-22.10` conda environment available in GADI.

## Citation
This repository can be cited as: **TBA**.
This repository can be cited as: Fierro-Arcos, D. (2023). Assessing the suitability of ACCESS-OM2-01 outputs for ecological applications (Version 1.0.0) [Computer software]. https://doi.org/TBA.

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