Add detailed docstrings and update README with PoC descriptions

[leonvanbokhorst]

Summary by Sourcery

Enhance code quality by adding comprehensive docstrings to classes and methods, and update the README with detailed descriptions of proof of concept implementations.

Enhancements:

• Add detailed docstrings to classes and methods across multiple modules to improve code readability and maintainability.

Documentation:

• Update README.md to include detailed descriptions of the latest proof of concept implementations, highlighting key features and components of each.

[sourcery-ai]

Reviewer's Guide by Sourcery

This PR focuses on code quality improvements across multiple files, primarily adding comprehensive docstrings to classes and methods, and making minor code optimizations. The changes enhance code readability and maintainability without altering core functionality.

Updated class diagram for the Memory class

classDiagram
    class Memory {
        +float timestamp
        +str interaction_type
        +float resonance
        +List~str~ themes
        +float emotional_impact
        +Optional~str~ partner_id
    }
    note for Memory "Represents a memory of an interaction or event in the narrative field."

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Updated class diagram for the StoryState class

classDiagram
    class StoryState {
        +float resonance_level
        +List~str~ active_themes
        +int interaction_count
        +update(Memory memory)
    }
    note for StoryState "Captures the evolving state of a story over time."

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Updated class diagram for the BaseClass and its derived classes

classDiagram
    class BaseClass {
        +logger
    }
    class ThemeRelationshipMap {
        +get_theme_resonance(str theme1, str theme2) float
    }
    class ThemeEvolutionEngine {
        +update_theme_resonance(str theme, float resonance)
        +evolve_themes(Story story, interaction_history)
    }
    class StoryPerspective {
        +update(np.ndarray other_filter, set shared_themes, float indirect_resonance, List~tuple~ theme_relationships) float
    }
    class EmotionalState {
        +update(Optional~EmotionalState~ other, float interaction_strength, Optional~LanguageModel~ llm)
    }
    class Story {
        +add_memory(Memory memory)
        +update_theme_influence(str theme, float influence)
    }
    BaseClass <|-- ThemeRelationshipMap
    BaseClass <|-- ThemeEvolutionEngine
    BaseClass <|-- StoryPerspective
    BaseClass <|-- EmotionalState
    BaseClass <|-- Story
    note for BaseClass "A base class that sets up logging for derived classes."

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File-Level Changes

Change	Details	Files
Added comprehensive docstrings to classes and methods	Added class-level docstrings explaining class purposes and responsibilities Added method-level docstrings with detailed parameter and return value descriptions Added attribute descriptions in class docstrings	src/nfd_three_story_evolve.py src/nfs_simple_lab_scenario.py src/nfs_story_waves.py
Improved code readability and organization	Simplified complex conditional expressions using assignment expressions Extracted complex code into separate methods Improved variable naming and code structure	src/nfs_story_waves.py src/nfs_simple_lab_scenario.py
Enhanced documentation and project structure	Added detailed implementation descriptions for each PoC Improved formatting and organization of documentation Added section headers and better structure to markdown files	README.md src/nfd_three_story_evolve.md

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[sourcery-ai]

Hey @leonvanbokhorst - I've reviewed your changes - here's some feedback:

Overall Comments:

• There appears to be a duplicate line story.velocity = self._limit_velocity(story.velocity) in the apply_field_constraints method that should be removed.

Here's what I looked at during the review

• 🟡 General issues: 1 issue found
• 🟢 Security: all looks good
• 🟢 Testing: all looks good
• 🟢 Complexity: all looks good
• 🟡 Documentation: 1 issue found

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