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1. GBS_SNP_filter GBS_SNP_filter Public

   filtering SNPs based on LD and HWE status

   R 10 5

2. UCE_processing_steps UCE_processing_steps Public

   The general workflow for processing UCE data that I use

   R 5 1

3. genetic_diversity_diffs genetic_diversity_diffs Public

   Tests for significant differences in genetic diversity between populations based on DNA sequence data

   R 4 1

4. bats_and_rats bats_and_rats Public

   Analyses corresponding to Mindanao PAIC bats and rats diversification project

   R 2 1

5. UCE_divergence_times UCE_divergence_times Public

   Using pairwise distances between UCE sequences to roughly date the MRCA of ingroup samples

   R 2 2

6. comparing_monolithic_UCE_fastas comparing_monolithic_UCE_fastas Public

   Blasting between monolithic UCE fasta files to find out which loci are shared between different base genomes

   R 2