Solve ties by the lowest stoichiometry assembly eppic-team#161

This ensures we always have a BIO assembly, and only one, for each structure.
lafita · Feb 9, 2017 · 41592d3 · 41592d3
1 parent fc6e801
commit 41592d3
Showing 1 changed file with 5 additions and 2 deletions.
diff --git a/eppic-cli/src/main/java/eppic/assembly/CrystalAssemblies.java b/eppic-cli/src/main/java/eppic/assembly/CrystalAssemblies.java
@@ -612,9 +612,12 @@ public void score() {
 			if (indices.size() == 1) {
 				uniques.get(maxIndx).setCall(CallType.BIO);
 			} else {
-				// if not a unique assembly
+				// if not a unique assembly, choose the lowest stoichiometry
 				for (Integer i:indices) {
-					uniques.get(i).setCall(CallType.NO_PREDICTION);
+					if (i == Collections.min(indices))
+						uniques.get(i).setCall(CallType.BIO);
+					else
+						uniques.get(i).setCall(CallType.CRYSTAL);
 				}
 			}
 		}