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Add meta.yaml file (#192)
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gjbaker authored Apr 10, 2024
1 parent 3b50134 commit 9b87a26
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61 changes: 61 additions & 0 deletions recipe/meta.yaml
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{% set name = "cylinter" %}
{% set version = "0.0.49" %}

package:
name: "{{ name|lower }}"
version: "{{ version }}"

source:
git_url: https://github.com/labsyspharm/cylinter.git
git_tag: v0.0.49

build:
number: 0
script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vv "
entry_points:
- cylinter=cylinter.cylinter:main
noarch: python

requirements:
build:
- poetry
host:
- pip
- python
- poetry
run:
- python
- cellcutter
- hdbscan
- joblib
- magicgui
- matplotlib <3.6 # avoids segmentation faults when closing silhouette plot in clustering module
- napari
- numpy
- natsort
- numba
- pandas
- pyarrow
- pyqt
- pyyaml
- qtpy
- scikit-image
- scikit-learn <=1.2.2 # avoids InconsistentVersionWarning: Trying to unpickle estimator Pipeline from version 1.2.2 when using version 1.3.1. because artifact detection model was built using v1.2.2
- seaborn
- tifffile
- umap-learn
- zarr
- svglib
- pypdf2
- imagecodecs # MIBI data fails to be read without this
- opencv

test:
imports:
- cylinter

about:
home: https://labsyspharm.github.io/cylinter/
license: MIT
license_family: BSD
summary: Quality Control Software for Multiplex Microscopy

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