Skip to content

Issues: kalininalab/alphafold_non_docker

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

20 Open 50 Closed
20 Open 50 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

How can I change the value of the argument "--models_to_relax"?
#78 opened Aug 9, 2024 by frtntik
How to run AlphaFold non docker in NVidia 4090 card?
#77 opened Jul 3, 2024 by longbow0
FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpzszd_m92/output.a3m'
#76 opened Apr 25, 2024 by 33LIKL
Error: Falling back to the CUDA driver for PTX compilation; ptxas does not support CC 8.9
#75 opened Apr 11, 2024 by shadowdeng1994
Looking for more options for subsampling enhancement New feature or request
#74 opened Apr 10, 2024 by velocirraptor23
2
Stuck on install step: https://github.com/deepmind/alphafold/archive does not exist
#73 opened Mar 9, 2024 by bwllc
1
ValueError: Could not find HHsearch database
#72 opened Feb 26, 2024 by Lili-irtyd
2
HHblits query running time is too long!
#71 opened Jan 25, 2024 by JLHU2021
Why did I enter Python directly when running this Bash script?
#70 opened Dec 6, 2023 by khanhtomiu
Unable to initialize backend 'tpu_driver'
#68 opened Aug 20, 2023 by rocketman8080
1
zipfile.BadZipFile: File is not a zip file
#67 opened Jul 30, 2023 by SHMinger
403 errors when trying to install Jax
#66 opened Jul 25, 2023 by DanYousefi
Sequence length problem
#65 opened Jul 24, 2023 by forever-happy-h
Too many command-line arguments.
#64 opened Jul 18, 2023 by kbrunnerLXG
2
GPU Utilization verification
#63 opened Jun 13, 2023 by rocketman8080
1
Absolute path of download script
#58 opened Feb 17, 2023 by zimb3l-priv
3
Failed to allocate 50331648 bytes for new constant
#55 opened Jan 1, 2023 by Violet969
1
Minimization failed after 100 attempts.
#51 opened Sep 24, 2022 by dahaigui
4
Low GPU memory-usage and 0 GPU-Util alphafold Issues that relate more with AlphaFold itself than with the Docker-free setup
#50 opened Sep 6, 2022 by xuxiaochen1209
1
Errors encountered when trying to run multimer mode
#35 opened Feb 10, 2022 by mingyue80
1
ProTip! Type g i on any issue or pull request to go back to the issue listing page.