Version 2.0.1

Major changes:

• Add draw.emb.kmeans() to replace draw.umap.kmeans and draw.pca.kmeans
• Add boxplot option in draw.eset.QC()
• Fix bug in generate.masterTable()
• User-defined color code with two options: use_color,pre_define passed to get.class.color().
  The modified functions are: draw.2D(), draw.2D.interactive(), draw.2D.text(), draw.3D(), draw.2D.ellipse(), draw.eset.QC(), draw.heatmap(), draw.categoryValue().
• Re-wrote the cal.Activity(), add in Matrix Cross Products, which accelerates the calculation time but consumes more memory. memory_constrain is an option to reduce memory usage to sacrifice some features.
• Modifed the draw.eset.QC(), added correlation plot. Modify draw.network.QC(), add html_info_limit.
• Modified the option name target_list in generate.masterTable()
• Rebuilt on R 3.6.0

Additions

• Created two "lazy mode" functions, NetBID.lazyMode.DriverVisualization(),NetBID.lazyMode.DriverEstimation().
• Added warning message for all functions.
• Added package information in calling functions to avoid possible conflict of function names.
• Added draw.2D.interactive(), and add option "2D.interactive" to draw.pca.kmeans(), draw.umap.kmeans().
• Added functions to judge abnormal values.
• Added option geneSymbol_column for SJAracne.prepare()