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Cross-val results for kiba and PDBbind #62

Merged
merged 34 commits into from
Nov 22, 2023
Merged

Cross-val results for kiba and PDBbind #62

merged 34 commits into from
Nov 22, 2023

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jyaacoub
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papiClafoutis and others added 30 commits November 3, 2023 15:14
Also playground contains plots for analysis of distributions.
+ update af2 file path for PDBbind
+ update aln_p to point to new PDBbind_aln dir instead in the init_dataset.py file.
+ Check to ensure aln file is not empty

Also recleaned aln files with MSARunner that were not cleaned before.
… development

Conflicts:
	results/model_media/model_stats.csv
	results/model_media/model_stats_val.csv
… development

Conflicts:
	results/model_media/model_stats_val.csv
Useful for when the model is currently being trained and we dont want to update the state dict and we just want to see results.
@jyaacoub jyaacoub linked an issue Nov 22, 2023 that may be closed by this pull request
@jyaacoub jyaacoub merged commit 9755564 into main Nov 22, 2023
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Statannotator indexing issue
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