! This paper is under review on the experimental track of the Journal of Visualization and Interaction.
Authors: @picorana
OC: Chat Wacharamanotham
AE: Lane Harrison
R1: mjwybrow
R2: eelir
R3: gdrawing-anon-reviewer

GLaDOS: Graph Layout algorithm Datasets for Open Science

This paper is under submission to the the experimental track at JoVI.

Papers for this track are written in Quarto which is an open source publishing format that supports inline code, including languages like R, Python, Julia, and JavaScript (via Observable Notebook).

!  Only edit .qmd files! The other files are generated from this.

See https://osf.io/j7ucv/ for more details on the related publication and supplemental materials.

Setup instructions

1. Clone the repo.

   • On Windows, we currently have paths in the data directory that are too long for git to handle. This prevents cloning. To avoid this problem, run git config --system core.longpaths true with administrator rights.

2. CD to the repo directory.

3. Install uv following their instructions.

Run instructions

Follow the instructions at https://quarto.org/docs/get-started/hello/. If you are using the VSCode Quarto extension and WSL, ensure you start VSCode from the repository directory by running code . at the WSL terminal.

For example, to preview the website run

uv run quarto preview --no-browser --no-watch-inputs

and to publish it to GitHub pages use

uv run quarto publish --no-prompt gh-pages

While you're editing, it is helpful to periodically delete the _site folder and regenerate it to ensure all changes are used and that warnings don't show up:

rm -rf _site