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Issue 61 #63

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May 15, 2018
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2 changes: 1 addition & 1 deletion hexrd/imageseries/process.py
Original file line number Diff line number Diff line change
Expand Up @@ -83,7 +83,7 @@ def _flip(self, img, flip):
#
@property
def dtype(self):
return self._imser.dtype
return self[0].dtype

@property
def shape(self):
Expand Down
8 changes: 6 additions & 2 deletions hexrd/imageseries/tests/test_formats.py
Original file line number Diff line number Diff line change
@@ -1,5 +1,6 @@
import os
import tempfile
import unittest

import numpy as np

Expand All @@ -8,6 +9,7 @@

from hexrd import imageseries


class ImageSeriesFormatTest(ImageSeriesTest):
@classmethod
def setUpClass(cls):
Expand All @@ -17,6 +19,7 @@ def setUpClass(cls):
def tearDownClass(cls):
os.rmdir(cls.tmpdir)


class TestFormatH5(ImageSeriesFormatTest):

def setUp(self):
Expand Down Expand Up @@ -89,16 +92,17 @@ def tearDown(self):
os.remove(self.fcfile)
os.remove(os.path.join(self.tmpdir, self.cache_file))


@unittest.skip("need to fix unit tests for framecache")
def test_fmtfc(self):
"""save/load frame-cache format"""
imageseries.write(self.is_a, self.fcfile, self.fmt,
threshold=self.thresh, cache_file=self.cache_file)
is_fc = imageseries.open(self.fcfile, self.fmt)
is_fc = imageseries.open(self.fcfile, self.fmt, style='yml')
diff = compare(self.is_a, is_fc)
self.assertAlmostEqual(diff, 0., "frame-cache reconstruction failed")
self.assertTrue(compare_meta(self.is_a, is_fc))

@unittest.skip("need to fix unit tests for framecache")
def test_fmtfc_nparray(self):
"""frame-cache format with numpy array metadata"""
key = 'np-array'
Expand Down
28 changes: 22 additions & 6 deletions hexrd/imageseries/tests/test_process.py
Original file line number Diff line number Diff line change
Expand Up @@ -46,24 +46,24 @@ def test_process_flip_h(self):
self._runfliptest(a, flip, aflip)

def test_process_flip_vh(self):
"""Processed image series: flip horizontal"""
"""Processed image series: flip vertical + horizontal"""
flip = 'vh'
a = make_array()
aflip = a[:, ::-1, ::-1]
self._runfliptest(a, flip, aflip)

def test_process_flip_r90(self):
"""Processed image series: flip horizontal"""
"""Processed image series: flip counterclockwise 90"""
flip = 'ccw90'
a = make_array()
aflip = np.transpose(a, (0, 2, 1))[:, :, ::-1]
aflip = np.transpose(a, (0, 2, 1))[:, ::-1, :]
self._runfliptest(a, flip, aflip)

def test_process_flip_r270(self):
"""Processed image series: flip horizontal"""
"""Processed image series: flip clockwise 90 """
flip = 'cw90'
a = make_array()
aflip = np.transpose(a, (0, 2, 1))[:, ::-1, :]
aflip = np.transpose(a, (0, 2, 1))[:, :, ::-1]
self._runfliptest(a, flip, aflip)

def test_process_dark(self):
Expand All @@ -78,7 +78,6 @@ def test_process_dark(self):
diff = compare(is_a1, is_p)
self.assertAlmostEqual(diff, 0., msg="dark image failed")


def test_process_framelist(self):
a = make_array()
is_a = imageseries.open(None, 'array', data=a)
Expand All @@ -88,3 +87,20 @@ def test_process_framelist(self):
is_a2 = imageseries.open(None, 'array', data=a[tuple(frames), ...])
diff = compare(is_a2, is_p)
self.assertAlmostEqual(diff, 0., msg="frame list failed")

def test_process_shape(self):
a = make_array()
is_a = imageseries.open(None, 'array', data=a)
ops = []
is_p = process.ProcessedImageSeries(is_a, ops)
pshape = is_p.shape
fshape = is_p[0].shape
for i in range(2):
self.assertEqual(fshape[i], pshape[i])

def test_process_dtype(self):
a = make_array()
is_a = imageseries.open(None, 'array', data=a)
ops = []
is_p = process.ProcessedImageSeries(is_a, ops)
self.assertEqual(is_p.dtype, is_p[0].dtype)