EcologicalHypergraphs.jl allows you to do ecology using hypergraphs. Currently, it
supports using hypergraphs do create large dynamical foodweb models which can incorporate
non-trophic effects. In the future, it will support statistical study of these hypergraphs
as well. It may also support embedding these hypergraphs in spatial networks in the
future to facilitate metacommunity models.
This package isn't yet in the Julia general registry. You can still install it directly from this git repository.
] add github.com/jkharv/EcologicalHypergraphs.jl
There are examples in the example directory of this repository.
SimpleHypergraphs.jl- Conversion functions are planned for converting to and from
SimpleHypergraphs.jltypes.
- Conversion functions are planned for converting to and from
EcologicalHypergraphs.jl currently has constructors for creating hypergraphs from
EcologicalNetworks.jl types, allowing access to all the structural models that it
provides. We will eventually include functions that can project hypergraphs into pairwise
graphs using EcologicalNetworks.jl types, allowing the use of existing analysis tools
in the package.
Dynamical models done in EcologicalHypergraphs.jl are specified using Symbolics.jl.
You can do anything that Symbolics.jl allows you to do to the resultant model.
Symbolics.jl is used via ModelingToolkit.jl meaning that parameters are tagged
differently than variables and creating numerical systems ModelingToolkit.jl does
all of its usual symbolic manipulations on the system.