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  1. ncbi_data_analysis ncbi_data_analysis Public

    Scripts to process NCBI data

    Python 1

  2. West_Africa_checklist West_Africa_checklist Public archive

    Data and code for Piepenbring et al. (2020) IMA Fungus 11:13

    R

  3. bash_seq_analysis bash_seq_analysis Public

    Miscellaneous bash scripts for analysis of sequence data

    Shell

  4. python_seq_analysis python_seq_analysis Public

    Miscellaneous python scripts to handle sequence data

    Python

  5. process_fungal_ITS-LSU process_fungal_ITS-LSU Public

    Process fungal ITS and LSU sequences for identification and performs phylogenetic analyses

    Shell

  6. MiSeq_process MiSeq_process Public

    Process of raw MiSeq reads with DADA2

    R

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January 2025

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