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  1. bagherilab/ARCADE bagherilab/ARCADE Public

    ARCADE: Agent-based model of heterogeneous cell populations in dynamic microenvironments

    Java 9 1

  2. allen-cell-animated/cell-abm-pipeline allen-cell-animated/cell-abm-pipeline Public

    Simulation, analysis, and visualization workflows for cell-scale agent-based models

    Python 2 1

  3. bagherilab/arcade_emergent_behavior bagherilab/arcade_emergent_behavior Public archive

    Supporting code for doi:10.3389/fbioe.2020.00249

    HTML 1

  4. bagherilab/arcade_vascular_dynamics bagherilab/arcade_vascular_dynamics Public archive

    Supporting code for doi:10.1016/j.cels.2021.05.007

    HTML 1

  5. bagherilab/arcade_modeling_choices bagherilab/arcade_modeling_choices Public archive

    Supporting code for doi:10.1371/journal.pcbi.1011917

    HTML 2