Genomic breeding workflow
Build Status | License |
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TODO: Consolidate db, gp, and simquantgen into this single workflow plus various selection strategies incorporating selection simulations
Manage the project via uv and ruff:
cd gb/
pip install uv
pip install ruff
uv init .
uv add pytest mypy numpy progressbar2 scikit-learn matplotlib polars click
uv run ruff format
uv run ruff check
uv run mypy data/*.py
uv run pytest -s