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update readme
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troonmel committed Sep 7, 2023
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# ../bbm-bnet-inputs-true - folder with networks
# SD_analysis.py - benchmark script
python3 ../benchmark/run_bench.py 1h ../bbm-bnet-inputs-true SD_analysis.py
```
```

You can optionally add `-p X` or `-i` flag at the end of the argument list.
The `-p` flag causes the benchmark to run in parallel in `X` processes.
The `-i` flag causes the benchmark to run in "interactive" mode where the user
can skip individual benchmarks.

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Coverage

Coverage Report
FileStmtsMissCoverMissing
nfvsmotifs
   SuccessionDiagram.py154497%6–7, 208, 452
   control.py1201389%47, 56, 60, 66, 80, 89–105, 319, 334
   interaction_graph_utils.py142894%6–9, 57, 70, 95–96
   motif_avoidant.py163696%23–24, 130, 147, 184, 309
   petri_net_translation.py84693%23–24, 52, 63–64, 94
   pyeda_utils.py953464%12, 56–66, 90, 95, 98–112, 140–144
   space_utils.py118596%15–16, 198, 213, 270
   state_utils.py681282%15, 55–66, 98, 105, 114
   terminal_restriction_space.py44393%6–7, 80
   trappist_core.py1862089%10–11, 39, 41, 81, 127, 192, 194, 196, 231–233, 259, 317, 319, 349, 389, 391, 422, 451
nfvsmotifs/FVSpython3
   FVS.py481079%90–91, 97, 133, 183–189
   FVS_localsearch_10_python.py90199%179
nfvsmotifs/_sd_algorithms
   compute_attractor_seeds.py29197%6
   expand_attractor_seeds.py51492%6, 95–100
   expand_bfs.py28196%6
   expand_dfs.py30197%6
   expand_minimal_spaces.py37197%6
   expand_to_target.py30390%6, 37, 42
TOTAL161413392% 

Tests Skipped Failures Errors Time
360 0 💤 0 ❌ 0 🔥 2m 53s ⏱️

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