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Typo.
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daemontus committed Sep 18, 2024
1 parent a3fc6b4 commit ae4ff68
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2 changes: 1 addition & 1 deletion biobalm/_sd_attractors/attractor_candidates.py
Original file line number Diff line number Diff line change
Expand Up @@ -124,7 +124,7 @@ def compute_attractor_candidates(
]

if node_data["skipped"]:
# For skip nodes, it does not holds that the successors are the maximal subspaces.
# For skip nodes, it does not hold that the successors are the maximal subspaces.
# This means that a skip node can intersect with some other SD node and that intersection
# is not a subset of one of its children. In such case, we can use this intersection
# to further simplify the attractor detection process.
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2 changes: 1 addition & 1 deletion biobalm/succession_diagram.py
Original file line number Diff line number Diff line change
Expand Up @@ -1253,7 +1253,7 @@ def expand_block(
all attractors, meaning it can get "stuck". However, assuming you want to run full attractor
detection anyway, this might save you some time, as you won't need to re-run the failed
candidate detection. (This is only relevant for models where the attractors are very
complex and the candidate state detection can fail with default settings)
complex and the candidate state detection can fail with default settings).
"""
return expand_source_blocks(
self,
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Coverage

Coverage Report
FileStmtsMissCoverMissing
biobalm
   _pint_reachability.py615018%24, 40–54, 69–93, 101–146
   control.py1141488%107, 119, 125, 129, 134, 143–159, 477, 480, 493
   interaction_graph_utils.py52688%11–13, 151–152, 222–223
   petri_net_translation.py1491292%22–26, 79, 136, 234, 308–309, 333–334, 343, 452
   space_utils.py1322085%26–28, 104–110, 133–139, 347–350, 414, 462
   succession_diagram.py43511574%6, 128, 218–223, 236, 283–290, 394–401, 418–419, 429, 435, 551, 638–644, 760, 763, 858–872, 903–921, 953, 963, 1006, 1013, 1064, 1082, 1204, 1393–1422, 1434–1471, 1500, 1511, 1519, 1562, 1574, 1579
   symbolic_utils.py32584%10, 39–44, 100, 128
   trappist_core.py1842388%14–18, 55, 57, 92, 215, 217, 219, 254–256, 276–282, 340, 342, 372, 420, 422
biobalm/_sd_algorithms
   expand_attractor_seeds.py60788%6, 28, 42, 109–114, 119
   expand_bfs.py28196%6
   expand_dfs.py30197%6
   expand_minimal_spaces.py662070%6, 35, 46–62, 70, 88, 99, 114
   expand_source_SCCs.py1111686%11–13, 50, 69, 77, 82, 103, 112, 120, 131, 140, 143, 167, 179, 242–243
   expand_source_blocks.py1232183%10, 31, 43–46, 58, 68, 75, 80, 83, 142, 168, 177, 208, 216–217, 221, 231, 237, 246
   expand_to_target.py31390%6, 38, 43
biobalm/_sd_attractors
   attractor_candidates.py28010363%13–15, 27–28, 94, 102, 108–109, 131–153, 162, 184, 219, 225–236, 255, 271–352, 357, 361, 367, 373, 388, 415, 420, 424, 430, 432–470, 543, 614–615, 716
   attractor_symbolic.py2244082%6–7, 39–40, 54–68, 77, 95, 102, 107, 112, 193, 206–210, 221, 230, 262, 298, 328–330, 349, 359–361, 371, 380, 422, 442, 449
TOTAL220345779% 

Tests Skipped Failures Errors Time
359 0 💤 0 ❌ 0 🔥 57.893s ⏱️

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