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Merge Pull Request trilinos#10327 from rppawlo/Trilinos/panzer-add-te…
…mpus-support Automatically Merged using Trilinos Pull Request AutoTester PR Title: Panzer add tempus support PR Author: rppawlo
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packages/panzer/adapters-stk/example/main_driver/energy-transient-tempus-blocked.xml
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packages/panzer/adapters-stk/example/main_driver/user_app_TempusObserverFactory.hpp
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| // @HEADER | ||
| // *********************************************************************** | ||
| // | ||
| // Panzer: A partial differential equation assembly | ||
| // engine for strongly coupled complex multiphysics systems | ||
| // Copyright (2011) Sandia Corporation | ||
| // | ||
| // Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, | ||
| // the U.S. Government retains certain rights in this software. | ||
| // | ||
| // Redistribution and use in source and binary forms, with or without | ||
| // modification, are permitted provided that the following conditions are | ||
| // met: | ||
| // | ||
| // 1. Redistributions of source code must retain the above copyright | ||
| // notice, this list of conditions and the following disclaimer. | ||
| // | ||
| // 2. Redistributions in binary form must reproduce the above copyright | ||
| // notice, this list of conditions and the following disclaimer in the | ||
| // documentation and/or other materials provided with the distribution. | ||
| // | ||
| // 3. Neither the name of the Corporation nor the names of the | ||
| // contributors may be used to endorse or promote products derived from | ||
| // this software without specific prior written permission. | ||
| // | ||
| // THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY | ||
| // EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
| // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR | ||
| // PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE | ||
| // CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, | ||
| // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, | ||
| // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR | ||
| // PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF | ||
| // LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING | ||
| // NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS | ||
| // SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. | ||
| // | ||
| // Questions? Contact Roger P. Pawlowski ([email protected]) and | ||
| // Eric C. Cyr ([email protected]) | ||
| // *********************************************************************** | ||
| // @HEADER | ||
|
|
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| #ifndef USER_APP_TEMPUS_OBSERVER_FACTORY_HPP | ||
| #define USER_APP_TEMPUS_OBSERVER_FACTORY_HPP | ||
|
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| #include "PanzerAdaptersSTK_config.hpp" | ||
|
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| #ifdef PANZER_HAVE_TEMPUS | ||
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| #include "Panzer_STK_TempusObserverFactory.hpp" | ||
| #include "Panzer_ResponseLibrary.hpp" | ||
| #include "Panzer_Traits.hpp" | ||
|
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| #include "Tempus_IntegratorObserverComposite.hpp" | ||
|
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| // Individual Observers | ||
| #include "user_app_TempusObserver_WriteToExodus.hpp" | ||
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| namespace user_app { | ||
|
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| class TempusObserverFactory : public panzer_stk::TempusObserverFactory { | ||
|
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| public: | ||
| TempusObserverFactory(const Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > & stkIOResponseLibrary, | ||
| const Teuchos::RCP<panzer::WorksetContainer> wkstContainer) | ||
| : stkIOResponseLibrary_(stkIOResponseLibrary) | ||
| , wkstContainer_(wkstContainer) | ||
| {} | ||
|
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| bool useNOXObserver() const { return false; } | ||
|
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| Teuchos::RCP<Tempus::IntegratorObserver<double> > | ||
| buildTempusObserver(const Teuchos::RCP<panzer_stk::STK_Interface>& mesh, | ||
| const Teuchos::RCP<const panzer::GlobalIndexer> & dof_manager, | ||
| const Teuchos::RCP<const panzer::LinearObjFactory<panzer::Traits> >& lof) const | ||
| { | ||
| Teuchos::RCP<Tempus::IntegratorObserverComposite<double> > composite_observer = | ||
| Teuchos::rcp(new Tempus::IntegratorObserverComposite<double>); | ||
|
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| { | ||
| Teuchos::RCP<user_app::TempusObserver_WriteToExodus> observer | ||
| = Teuchos::rcp(new user_app::TempusObserver_WriteToExodus(mesh,dof_manager,lof,stkIOResponseLibrary_)); | ||
| composite_observer->addObserver(observer); | ||
| } | ||
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| return composite_observer; | ||
| } | ||
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| private: | ||
| //! Store STK IO response library...be careful, it will be modified externally | ||
| Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > stkIOResponseLibrary_; | ||
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| Teuchos::RCP<panzer::WorksetContainer> wkstContainer_; | ||
| }; | ||
|
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| } | ||
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| #endif // PANZER_HAVE_TEMPUS | ||
| #endif |
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packages/panzer/adapters-stk/example/main_driver/user_app_TempusObserver_WriteToExodus.hpp
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,127 @@ | ||
| // @HEADER | ||
| // *********************************************************************** | ||
| // | ||
| // Panzer: A partial differential equation assembly | ||
| // engine for strongly coupled complex multiphysics systems | ||
| // Copyright (2011) Sandia Corporation | ||
| // | ||
| // Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, | ||
| // the U.S. Government retains certain rights in this software. | ||
| // | ||
| // Redistribution and use in source and binary forms, with or without | ||
| // modification, are permitted provided that the following conditions are | ||
| // met: | ||
| // | ||
| // 1. Redistributions of source code must retain the above copyright | ||
| // notice, this list of conditions and the following disclaimer. | ||
| // | ||
| // 2. Redistributions in binary form must reproduce the above copyright | ||
| // notice, this list of conditions and the following disclaimer in the | ||
| // documentation and/or other materials provided with the distribution. | ||
| // | ||
| // 3. Neither the name of the Corporation nor the names of the | ||
| // contributors may be used to endorse or promote products derived from | ||
| // this software without specific prior written permission. | ||
| // | ||
| // THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY | ||
| // EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
| // IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR | ||
| // PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE | ||
| // CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, | ||
| // EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, | ||
| // PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR | ||
| // PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF | ||
| // LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING | ||
| // NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS | ||
| // SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. | ||
| // | ||
| // Questions? Contact Roger P. Pawlowski ([email protected]) and | ||
| // Eric C. Cyr ([email protected]) | ||
| // *********************************************************************** | ||
| // @HEADER | ||
|
|
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| #ifndef USER_APP_TEMPUS_OBSERVER_WRITE_TO_EXODUS_HPP | ||
| #define USER_APP_TEMPUS_OBSERVER_WRITE_TO_EXODUS_HPP | ||
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| #include "Tempus_Integrator.hpp" | ||
| #include "Tempus_IntegratorObserver.hpp" | ||
| #include "Teuchos_RCP.hpp" | ||
| #include "Teuchos_Assert.hpp" | ||
|
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| #include "Panzer_STK_Interface.hpp" | ||
| #include "Panzer_GlobalIndexer.hpp" | ||
| #include "Panzer_STK_ResponseEvaluatorFactory_SolutionWriter.hpp" | ||
| #include "Panzer_STK_Utilities.hpp" | ||
|
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| namespace user_app { | ||
|
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| class TempusObserver_WriteToExodus : public Tempus::IntegratorObserver<double> { | ||
|
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| public: | ||
|
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| TempusObserver_WriteToExodus(const Teuchos::RCP<panzer_stk::STK_Interface>& mesh, | ||
| const Teuchos::RCP<const panzer::GlobalIndexer>& dof_manager, | ||
| const Teuchos::RCP<const panzer::LinearObjFactory<panzer::Traits> >& lof, | ||
| const Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > & response_library) : | ||
| m_mesh(mesh), | ||
| m_dof_manager(dof_manager), | ||
| m_lof(lof), | ||
| m_response_library(response_library) | ||
| { | ||
| // get all element blocks and add them to the list | ||
| std::vector<std::string> eBlocks; | ||
| mesh->getElementBlockNames(eBlocks); | ||
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| panzer_stk::RespFactorySolnWriter_Builder builder; | ||
| builder.mesh = mesh; | ||
| m_response_library->addResponse("Main Field Output",eBlocks,builder); | ||
| } | ||
|
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| void observeStartIntegrator(const Tempus::Integrator<double>& integrator) override {this->writeToExodus(integrator);}; | ||
| void observeStartTimeStep(const Tempus::Integrator<double>& ) override {}; | ||
| void observeNextTimeStep(const Tempus::Integrator<double>& ) override {}; | ||
| void observeBeforeTakeStep(const Tempus::Integrator<double>& ) override {}; | ||
| void observeAfterTakeStep(const Tempus::Integrator<double>& integrator) override {this->writeToExodus(integrator);} | ||
| void observeAfterCheckTimeStep(const Tempus::Integrator<double>& ) override {}; | ||
| void observeEndTimeStep(const Tempus::Integrator<double>& ) override {}; | ||
| void observeEndIntegrator(const Tempus::Integrator<double>& ) override {}; | ||
|
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| void writeToExodus(const Tempus::Integrator<double>& integrator) | ||
| { | ||
|
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| Teuchos::RCP<const Thyra::VectorBase<double> > solution = integrator.getSolutionHistory()->getStateTimeIndexN()->getX(); | ||
|
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| // initialize the assembly container | ||
| panzer::AssemblyEngineInArgs ae_inargs; | ||
| ae_inargs.container_ = m_lof->buildLinearObjContainer(); | ||
| ae_inargs.ghostedContainer_ = m_lof->buildGhostedLinearObjContainer(); | ||
| ae_inargs.alpha = 0.0; | ||
| ae_inargs.beta = 1.0; | ||
| ae_inargs.evaluate_transient_terms = false; | ||
|
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| // initialize the ghosted container | ||
| m_lof->initializeGhostedContainer(panzer::LinearObjContainer::X,*ae_inargs.ghostedContainer_); | ||
|
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| { | ||
| // initialize the x vector | ||
| const Teuchos::RCP<panzer::ThyraObjContainer<double> > thyraContainer | ||
| = Teuchos::rcp_dynamic_cast<panzer::ThyraObjContainer<double> >(ae_inargs.container_,true); | ||
| thyraContainer->set_x_th(Teuchos::rcp_const_cast<Thyra::VectorBase<double> >(solution)); | ||
| } | ||
|
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| m_response_library->addResponsesToInArgs<panzer::Traits::Residual>(ae_inargs); | ||
| m_response_library->evaluate<panzer::Traits::Residual>(ae_inargs); | ||
| m_mesh->writeToExodus(integrator.getSolutionHistory()->getCurrentTime()); | ||
| } | ||
|
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| protected: | ||
|
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| Teuchos::RCP<panzer_stk::STK_Interface> m_mesh; | ||
| Teuchos::RCP<const panzer::GlobalIndexer> m_dof_manager; | ||
| Teuchos::RCP<const panzer::LinearObjFactory<panzer::Traits> > m_lof; | ||
| Teuchos::RCP<panzer::ResponseLibrary<panzer::Traits> > m_response_library; | ||
| }; | ||
|
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| } | ||
|
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| #endif |
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