Appstruct #282
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: | |
| pull_request: | |
| workflow_dispatch: | |
| env: | |
| CONDA_TYPE: Mambaforge | |
| CONDA_VERSION: 23.1.0-1 | |
| CONDA_PATH: /opt/conda | |
| CONDA_CACHEBUST: 1 | |
| FBF_ENV_CACHEBUST: 1 | |
| jobs: | |
| test: | |
| name: fbf-test | |
| runs-on: ubuntu-22.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: restore miniconda cache | |
| id: restore-miniconda | |
| uses: actions/cache/restore@v3 | |
| with: | |
| path: ${{env.CONDA_PATH}} | |
| key: miniconda-${{env.CONDA_TYPE}}-${{env.CONDA_VERSION}}-${{env.CONDA_CACHEBUST}} | |
| # I tried and rejected the existing setup-miniconda action, | |
| # because it wipes out a bunch of files like ~/.profile, | |
| # ~/.bashrc, ~/.bash_profile in a way that (a) won't interact | |
| # well with other actions that also need to modify the shell | |
| # environment, and (b) doesn't play well with caching (you can't | |
| # cache the deletion of a file). Also this way seems to take | |
| # about half the time (though that might just be random | |
| # variation). | |
| - name: download miniconda | |
| run: curl -L --no-progress-meter -o miniconda-installer.sh "https://github.com/conda-forge/miniforge/releases/download/${{env.CONDA_VERSION}}/${{env.CONDA_TYPE}}-${{env.CONDA_VERSION}}-Linux-x86_64.sh" | |
| if: steps.restore-miniconda.outputs.cache-hit != 'true' | |
| - name: run miniconda installer | |
| run: bash miniconda-installer.sh -b -p ${{env.CONDA_PATH}} | |
| if: steps.restore-miniconda.outputs.cache-hit != 'true' | |
| - name: clean up miniconda to reduce cache size | |
| run: rm miniconda-installer.sh && source ${{env.CONDA_PATH}}/etc/profile.d/conda.sh && conda clean -afy | |
| if: steps.restore-miniconda.outputs.cache-hit != 'true' | |
| - name: save miniconda cache | |
| uses: actions/cache/save@v3 | |
| with: | |
| path: ${{env.CONDA_PATH}} | |
| key: miniconda-${{env.CONDA_TYPE}}-${{env.CONDA_VERSION}}-${{env.CONDA_CACHEBUST}} | |
| if: steps.restore-miniconda.outputs.cache-hit != 'true' | |
| - name: restore fbfmaproom conda environment cache | |
| id: restore-fbfmaproom-env | |
| uses: actions/cache/restore@v3 | |
| with: | |
| path: ${{env.CONDA_PATH}}/envs/fbfmaproom | |
| key: fbfmaproom-env-${{ hashFiles('fbfmaproom/conda-linux-64.lock') }}-${{env.CONDA_CACHEBUST}}-${{env.FBF_ENV_CACHEBUST}} | |
| - name: install fbfmaproom dependencies | |
| run: source ${{env.CONDA_PATH}}/etc/profile.d/conda.sh && mamba create -n fbfmaproom --file fbfmaproom/conda-linux-64.lock | |
| if: steps.restore-fbfmaproom-env.outputs.cache-hit != 'true' | |
| - name: save fbfmaproom conda environment cache | |
| uses: actions/cache/save@v3 | |
| with: | |
| path: ${{env.CONDA_PATH}}/envs/fbfmaproom | |
| key: fbfmaproom-env-${{ hashFiles('fbfmaproom/conda-linux-64.lock') }}-${{env.CONDA_CACHEBUST}}-${{env.FBF_ENV_CACHEBUST}} | |
| if: steps.restore-fbfmaproom-env.outputs.cache-hit != 'true' | |
| - name: run fbf tests | |
| run: source ${{env.CONDA_PATH}}/etc/profile.d/conda.sh && conda activate fbfmaproom && cd fbfmaproom && CONFIG=fbfmaproom-sample.yaml python -m pytest tests/test_pingrid.py |