Training

.github/workflows/check.yaml

@@ -10,6 +10,7 @@ on:
       - ready_for_review
     branches:
       - main
+      - training
   push:
     branches:
       - main

.pre-commit-config.yaml

@@ -9,22 +9,25 @@ repos:
         args: [--style_pkg=styler, --style_fun=tidyverse_style]
       - id: roxygenize
         additional_dependencies:
-          - r-lib/cli@*release
-          - r-lib/desc@*release
-          - r-lib/gh@*release
-          - r-lib/pkgcache@*release
-          - r-lib/pkgdepends@*release
-          - r-lib/rcmdcheck@*release
-          - r-lib/remotes@*release
+          - cli
+          - desc
+          - gh
+          - knitr
+          - pkgcache
+          - pkgdepends
+          - rcmdcheck
+          - remotes
+          - stats
           - utils
-          - r-lib/zip@*release
+          - withr
       # codemeta must be above use-tidy-description when both are used
       # -   id: codemeta-description-updated
       - id: use-tidy-description
       - id: spell-check
         exclude: >
           (?x)^(
           data/.*|
+          inst/.*|
           (.*/|)\.Rprofile|
           (.*/|)\.Renviron|
           (.*/|)\.gitignore|

DESCRIPTION

@@ -3,8 +3,11 @@ Package: verdepcheck
 Title: Check Package using Various Versions of Dependencies
 Version: 0.0.0.9000
 Date: 2023-02-14
-Authors@R:
-    person("Pawel Rucki", , , "[email protected]", role = c("aut", "cre"))
+Authors@R: c(
+    person("Pawel Rucki", , , "[email protected]", role = c("aut", "cre")),
+    person("Andre Verissimo", , , "[email protected]", role = "aut"),
+    person("F. Hoffmann-La Roche AG", role = c("cph", "fnd"))
+  )
 Description: Derive package dependencies from DESCRIPTION file using various strategies and run "R CMD CHECK" to validate package compatibility.
 License: Apache License 2.0 | file LICENSE
 URL: https://github.com/insightsengineering/verdepcheck/
@@ -20,23 +23,23 @@ Imports:
     rcmdcheck,
     remotes (>= 2.2.0),
     stats,
-    utils
+    utils,
+    withr (>= 2.4.3)
 Suggests:
     knitr (>= 1.42),
     pingr,
-    testthat (>= 3.0.4),
-    withr (>= 2.4.3)
+    testthat (>= 3.0.4)
 Config/Needs/verdepcheck:
     r-lib/desc,
     r-lib/gh,
     r-lib/pkgcache,
     r-lib/pkgdepends,
     r-lib/rcmdcheck,
     r-lib/remotes,
+    r-lib/withr,
     yihui/knitr,
     r-lib/pingr,
-    r-lib/testthat,
-    r-lib/withr
+    r-lib/testthat
 VignetteBuilder:
     knitr
 Encoding: UTF-8

LICENSE

@@ -1,201 +1,13 @@
-                                 Apache License
-                           Version 2.0, January 2004
-                        http://www.apache.org/licenses/
+Copyright 2022 F. Hoffmann-La Roche AG
 
-   TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+Licensed under the Apache License, Version 2.0 (the "License");
+you may not use this file except in compliance with the License.
+You may obtain a copy of the License at
 
-   1. Definitions.
+    http://www.apache.org/licenses/LICENSE-2.0
 
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-      "You" (or "Your") shall mean an individual or Legal Entity
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-      "Source" form shall mean the preferred form for making modifications,
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NAMESPACE

@@ -6,26 +6,61 @@ S3method(get_ref_min,remote_ref_github)
 S3method(get_ref_min,remote_ref_standard)
 S3method(get_ref_min_incl_cran,remote_ref)
 S3method(get_ref_min_incl_cran,remote_ref_github)
+S3method(get_release_date,remote_ref)
+S3method(get_release_date,remote_ref_cran)
+S3method(get_release_date,remote_ref_github)
+S3method(get_release_date,remote_ref_standard)
+S3method(solve_ip,deps_installation_proposal)
+S3method(solve_ip,min_isolated_deps_installation_proposal)
+export(check_ip)
+export(download_ip)
+export(execute_ip)
 export(get_ref_max)
+export(get_ref_min)
+export(get_ref_min_incl_cran)
 export(get_ref_release)
+export(get_release_date)
+export(install_ip)
 export(max_deps_check)
-export(min_deps_check)
+export(min_cohort_deps_check)
+export(min_isolated_deps_check)
 export(new_max_deps_installation_proposal)
-export(new_min_deps_installation_proposal)
+export(new_min_cohort_deps_installation_proposal)
+export(new_min_isolated_deps_installation_proposal)
 export(new_release_deps_installation_proposal)
 export(release_deps_check)
+export(solve_ip)
+importFrom(cli,cli_alert_danger)
 importFrom(cli,cli_progress_bar)
 importFrom(cli,cli_progress_update)
+importFrom(cli,col_blue)
+importFrom(cli,col_green)
+importFrom(cli,col_yellow)
+importFrom(cli,pb_current)
+importFrom(cli,pb_elapsed)
+importFrom(cli,pb_eta)
+importFrom(cli,pb_extra)
+importFrom(cli,pb_spin)
+importFrom(cli,pb_total)
+importFrom(cli,style_bold)
+importFrom(cli,symbol)
 importFrom(desc,desc)
 importFrom(gh,gh)
 importFrom(gh,gh_gql)
 importFrom(pkgcache,cran_archive_list)
 importFrom(pkgcache,meta_cache_list)
+importFrom(pkgcache,ppm_repo_url)
+importFrom(pkgcache,ppm_snapshots)
+importFrom(pkgdepends,as_pkg_dependencies)
 importFrom(pkgdepends,new_pkg_deps)
 importFrom(pkgdepends,new_pkg_installation_proposal)
 importFrom(pkgdepends,parse_pkg_ref)
+importFrom(pkgdepends,parse_pkg_refs)
 importFrom(pkgdepends,pkg_dep_types)
 importFrom(rcmdcheck,rcmdcheck)
 importFrom(remotes,github_remote)
+importFrom(stats,na.omit)
 importFrom(stats,setNames)
+importFrom(utils,head)
 importFrom(utils,installed.packages)
+importFrom(withr,defer)