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Added h_map_for_count_abnormal so that the map used in trim_levels_to_map split function can be created by calling this helper function. Currently it supports two methods: one with all observed mapping, one with at least low limit above zero and at least one non missing high limit.
Added s_summary_numeric_in_cols and summarize_vars_numeric_in_cols functions to generate summary statistics in columns, mainly used for PK datasets.
Added five statistics to s_summary.numeric to use in s_summary_numeric_in_cols.
Enhancements
Enhanced functions tabulate_survival_subgroups and tabulate_rsp_subgroups (Survival Duration and Best Overall Response analyses) to calculate N-s based on the records considered to create the model.
Enhanced the function estimate_proportion and related functions to be able to apply a continuity correction in the Wilson method.
Refactored count_abnormal_by_marked and related statistics and formatting functions to use a more efficient layout with .spl_context argument used for determining denominators and with trim_levels_to_map split function under split_rows_by to show only the desired levels in the table. This is a breaking change.
Refactored count_abnormal_by_worst_grade and related statistics and formatting functions to use a more efficient layout with .spl_context argument used for determining denominators and with trim_levels_to_map split function under split_rows_by to show only the desired levels in the table. This is a breaking change.
Refactored count_abnormal function and related statistics and formatting functions to use a more efficient layout with trim_levels_to_map split function under split_rows_by to show only the desired levels in the table. Also updated abnormal argument to be able to consider more than one level for each direction. This is a breaking change.
Enhanced the function estimate_incidence_rate and related functions to consider the week as time unit for data input.
Bug fixes
Fixed bug in assertthat functions that output wrong data frame names and limited length of failure message outputs.
Miscellaneous
Removed dependency on utils.nest by using the checkmate and purrr packages for validation and moved get_free_cores and skip_if_too_deep functions from utils.nest into tern.