Feature branch PR

.gitignore

@@ -30,3 +30,4 @@ vignettes/*.md
 inst/doc
 tests/testthat/_snaps/**/*.new.md
 tests/testthat/_snaps/**/*.new.svg
+teal_app.lock

DESCRIPTION

@@ -45,7 +45,6 @@ Imports:
     jsonlite,
     lifecycle (>= 0.2.0),
     logger (>= 0.2.0),
-    magrittr (>= 1.5),
     methods,
     promises (>= 1.3.0),
     renv (>= 1.0.7),
@@ -98,20 +97,24 @@ Collate:
     'init.R'
     'landing_popup_module.R'
     'module_bookmark_manager.R'
+    'module_data_summary.R'
+    'module_filter_data.R'
     'module_filter_manager.R'
+    'module_init_data.R'
     'module_nested_tabs.R'
     'module_snapshot_manager.R'
-    'module_tabs_with_filters.R'
     'module_teal.R'
+    'module_teal_data.R'
     'module_teal_with_splash.R'
-    'module_wunder_bar.R'
+    'module_transform_data.R'
     'reporter_previewer_module.R'
     'show_rcode_modal.R'
     'tdata.R'
     'teal.R'
     'teal_data_module.R'
     'teal_data_module-eval_code.R'
     'teal_data_module-within.R'
+    'teal_data_utils.R'
     'teal_lockfile.R'
     'teal_reporter.R'
     'teal_slices-store.R'

NAMESPACE

@@ -3,19 +3,17 @@
 S3method(c,teal_slices)
 S3method(format,teal_module)
 S3method(format,teal_modules)
-S3method(get_metadata,default)
-S3method(get_metadata,tdata)
 S3method(join_keys,tdata)
 S3method(print,teal_module)
 S3method(print,teal_modules)
-S3method(srv_nested_tabs,default)
-S3method(srv_nested_tabs,teal_module)
-S3method(srv_nested_tabs,teal_modules)
-S3method(ui_nested_tabs,default)
-S3method(ui_nested_tabs,teal_module)
-S3method(ui_nested_tabs,teal_modules)
+S3method(srv_teal_module,default)
+S3method(srv_teal_module,teal_module)
+S3method(srv_teal_module,teal_modules)
+S3method(ui_teal_module,default)
+S3method(ui_teal_module,shiny.tag)
+S3method(ui_teal_module,teal_module)
+S3method(ui_teal_module,teal_modules)
 S3method(within,teal_data_module)
-export("%>%")
 export(TealReportCard)
 export(as.teal_slices)
 export(as_tdata)
@@ -31,10 +29,13 @@ export(new_tdata)
 export(report_card_template)
 export(reporter_previewer_module)
 export(show_rcode_modal)
+export(srv_teal)
 export(srv_teal_with_splash)
 export(tdata2env)
 export(teal_data_module)
 export(teal_slices)
+export(teal_transform_module)
+export(ui_teal)
 export(ui_teal_with_splash)
 export(validate_has_data)
 export(validate_has_elements)
@@ -47,7 +48,9 @@ export(validate_one_row_per_id)
 import(shiny)
 import(teal.data)
 import(teal.slice)
-importFrom(magrittr,"%>%")
+importFrom(methods,new)
 importFrom(methods,setMethod)
+importFrom(shiny,reactiveVal)
+importFrom(shiny,reactiveValues)
 importFrom(stats,setNames)
 importMethodsFrom(teal.code,eval_code)

NEWS.md

@@ -1,14 +1,24 @@
 # teal 0.15.2.9050
 
-### Enhancement
-* Provided progress bar for modules loading and data filtering during teal app startup.
-
 ### New features
 
-* Possibility to download lockfile to restore app session for reproducibility.
+* Possible to call `ui_teal` and `srv_teal` directly in any application by delivering `data` argument as a `reactive` returning `teal_data` object. #669
+* Introduced `teal_transform_module` to provide a way to interactively modify data delivered to `teal_module`'s `server`. #1228
+* Introduced a new argument `once = FALSE` in `teal_data_module` to possibly reload data during a run time.
+* Possibility to download lockfile to restore app session for reproducibility. #479
 
-### Miscellaneous
-* Filter mapping display is no longer coupled to the snapshot manager.
+
+### Breaking changes
+
+* The `landing_popup_module()` needs to be passed as the `landing_popup` argument of `init` instead of being passed as a module of the `modules` argument of `init`.
+* `teal` no longer re-export `%>%`. Please load `library(magrittr)` instead or use `|>` from `base`.
+
+### Enhancement
+
+* Enhanced a system of data validation and a display of error messages.
+* Easier way of to call `javascript` events by setting `$(document).ready(function() { ... })`. #1114
+* Provided progress bar for modules loading and data filtering during teal app startup.
+* Filter mapping display has a separate icon in the tab.
 
 # teal 0.15.2
 

R/TealAppDriver.R

@@ -23,7 +23,7 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
     #' @description
     #' Initialize a `TealAppDriver` object for testing a `teal` application.
     #'
-    #' @param data,modules,filter,title,header,footer arguments passed to `init`
+    #' @param data,modules,filter,title,header,footer,landing_popup arguments passed to `init`
     #' @param timeout (`numeric`) Default number of milliseconds for any timeout or
     #' timeout_ parameter in the `TealAppDriver` class.
     #' Defaults to 20s.
@@ -45,6 +45,7 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
                           title = build_app_title(),
                           header = tags$p(),
                           footer = tags$p(),
+                          landing_popup = NULL,
                           timeout = rlang::missing_arg(),
                           load_timeout = rlang::missing_arg(),
                           ...) {
@@ -57,7 +58,8 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
         filter = filter,
         title = title,
         header = header,
-        footer = footer
+        footer = footer,
+        landing_popup = landing_popup,
       )
 
       # Default timeout is hardcoded to 4s in shinytest2:::resolve_timeout
@@ -166,13 +168,11 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
     navigate_teal_tab = function(tabs) {
       checkmate::check_character(tabs, min.len = 1)
       for (tab in tabs) {
-        root <- "root"
         self$set_input(
-          sprintf("teal-main_ui-%s-active_tab", root),
+          "teal-teal_modules-active_tab",
           get_unique_labels(tab),
           wait_ = FALSE
         )
-        root <- sprintf("%s-%s", private$modules$label, get_unique_labels(tab))
       }
       self$wait_for_idle()
       private$set_active_ns()
@@ -229,6 +229,26 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
       private$ns$filter_panel
     },
     #' @description
+    #' Get the active shiny name space for interacting with the data-summary panel.
+    #'
+    #' @return (`string`) The active shiny name space of the data-summary component.
+    active_data_summary_ns = function() {
+      if (identical(private$ns$data_summary, character(0))) {
+        private$set_active_ns()
+      }
+      private$ns$data_summary
+    },
+    #' @description
+    #' Get the active shiny name space bound with a custom `element` name.
+    #'
+    #' @param element `character(1)` custom element name.
+    #'
+    #' @return (`string`) The active shiny name space of the component bound with the input `element`.
+    active_data_summary_element = function(element) {
+      checkmate::assert_string(element)
+      sprintf("#%s-%s", self$active_data_summary_ns(), element)
+    },
+    #' @description
     #' Get the input from the module in the `teal` app.
     #' This function will only access inputs from the name space of the current active teal module.
     #'
@@ -262,9 +282,10 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
     get_active_module_table_output = function(table_id, which = 1) {
       checkmate::check_number(which, lower = 1)
       checkmate::check_string(table_id)
-      table <- self$active_module_element(table_id) %>%
-        self$get_html_rvest() %>%
-        rvest::html_table(fill = TRUE)
+      table <- rvest::html_table(
+        self$get_html_rvest(self$active_module_element(table_id)),
+        fill = TRUE
+      )
       if (length(table) == 0) {
         data.frame()
       } else {
@@ -310,19 +331,37 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
     #' Get the active datasets that can be accessed via the filter panel of the current active teal module.
     get_active_filter_vars = function() {
       displayed_datasets_index <- self$is_visible(
-        sprintf("#%s-active-filter_active_vars_contents > span", self$active_filters_ns())
+        sprintf("#%s-filters-filter_active_vars_contents > span", self$active_filters_ns())
       )
 
       available_datasets <- self$get_text(
         sprintf(
-          "#%s-active-filter_active_vars_contents .filter_panel_dataname",
+          "#%s-filters-filter_active_vars_contents .filter_panel_dataname",
           self$active_filters_ns()
         )
       )
 
       available_datasets[displayed_datasets_index]
     },
     #' @description
+    #' Get the active data summary table
+    #' @return `data.frame`
+    get_active_data_summary_table = function() {
+      summary_table <- rvest::html_table(
+        self$get_html_rvest(self$active_data_summary_element("table")),
+        fill = TRUE
+      )[[1]]
+
+      col_names <- unlist(summary_table[1, ], use.names = FALSE)
+      summary_table <- summary_table[-1, ]
+      colnames(summary_table) <- col_names
+      if (nrow(summary_table) > 0) {
+        summary_table
+      } else {
+        NULL
+      }
+    },
+    #' @description
     #' Test if `DOM` elements are visible on the page with a JavaScript call.
     #' @param selector (`character(1)`) `CSS` selector to check visibility.
     #' A `CSS` id will return only one element if the UI is well formed.
@@ -371,14 +410,17 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
       active_filters <- lapply(
         datasets,
         function(x) {
-          var_names <- self$get_text(
-            sprintf(
-              "#%s-active-%s-filters .filter-card-varname",
-              self$active_filters_ns(),
-              x
+          var_names <- gsub(
+            pattern = "\\s",
+            replacement = "",
+            self$get_text(
+              sprintf(
+                "#%s-filters-%s .filter-card-varname",
+                self$active_filters_ns(),
+                x
+              )
             )
-          ) %>%
-            gsub(pattern = "\\s", replacement = "")
+          )
           structure(
             lapply(var_names, private$get_active_filter_selection, dataset_name = x),
             names = var_names
@@ -402,10 +444,19 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
     add_filter_var = function(dataset_name, var_name, ...) {
       checkmate::check_string(dataset_name)
       checkmate::check_string(var_name)
+      private$set_active_ns()
+      self$click(
+        selector = sprintf(
+          "#%s-filters-%s-add_filter_icon",
+          private$ns$filter_panel,
+          dataset_name
+        )
+      )
       self$set_input(
         sprintf(
-          "%s-add-%s-filter-var_to_add",
-          self$active_filters_ns(),
+          "%s-filters-%s-%s-filter-var_to_add",
+          private$ns$filter_panel,
+          dataset_name,
           dataset_name
         ),
         var_name,
@@ -468,7 +519,7 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
       checkmate::check_string(input)
 
       input_id_prefix <- sprintf(
-        "%s-active-%s-filter-%s_%s-inputs",
+        "%s-filters-%s-filter-%s_%s-inputs",
         self$active_filters_ns(),
         dataset_name,
         dataset_name,
@@ -492,7 +543,7 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
 
       # Generate correct namespace
       slices_input_id <- sprintf(
-        "%s-active-%s-filter-%s_%s-inputs-%s",
+        "%s-filters-%s-filter-%s_%s-inputs-%s",
         self$active_filters_ns(),
         dataset_name,
         dataset_name,
@@ -542,9 +593,10 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
     #'
     #' @return The `character` vector.
     get_attr = function(selector, attribute) {
-      self$get_html_rvest("html") %>%
-        rvest::html_nodes(selector) %>%
-        rvest::html_attr(attribute)
+      rvest::html_attr(
+        rvest::html_nodes(self$get_html_rvest("html"), selector),
+        attribute
+      )
     },
     #' @description
     #' Wrapper around `get_html` that passes the output directly to `rvest::read_html`.
@@ -602,14 +654,13 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
       all_inputs <- self$get_values()$input
       active_tab_inputs <- all_inputs[grepl("-active_tab$", names(all_inputs))]
 
-      tab_ns <- lapply(names(active_tab_inputs), function(name) {
+      tab_ns <- unlist(lapply(names(active_tab_inputs), function(name) {
         gsub(
           pattern = "-active_tab$",
           replacement = sprintf("-%s", active_tab_inputs[[name]]),
           name
         )
-      }) %>%
-        unlist()
+      }))
       active_ns <- tab_ns[1]
       if (length(tab_ns) > 1) {
         for (i in 2:length(tab_ns)) {
@@ -621,11 +672,16 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
       }
       private$ns$module <- sprintf("%s-%s", active_ns, "module")
 
-      component <- "filter_panel"
-      if (!is.null(self$get_html(sprintf("#teal-main_ui-%s", component)))) {
-        private$ns[[component]] <- sprintf("teal-main_ui-%s", component)
-      } else {
-        private$ns[[component]] <- sprintf("%s-module_%s", active_ns, component)
+      components <- c("filter_panel", "data_summary")
+      for (component in components) {
+        if (
+          !is.null(self$get_html(sprintf("#%s-%s-panel", active_ns, component))) ||
+            !is.null(self$get_html(sprintf("#%s-%s-table", active_ns, component)))
+        ) {
+          private$ns[[component]] <- sprintf("%s-%s", active_ns, component)
+        } else {
+          private$ns[[component]] <- sprintf("%s-module_%s", active_ns, component)
+        }
       }
     },
     # @description
@@ -639,7 +695,7 @@ TealAppDriver <- R6::R6Class( # nolint: object_name.
       checkmate::check_string(dataset_name)
       checkmate::check_string(var_name)
       input_id_prefix <- sprintf(
-        "%s-active-%s-filter-%s_%s-inputs",
+        "%s-filters-%s-filter-%s_%s-inputs",
         self$active_filters_ns(),
         dataset_name,
         dataset_name,