Merge pull request #228 from gab1one/add-stopwatch

Add StopWatch utility from imglib2-cache

src/main/java/net/imglib2/util/StopWatch.java

@@ -0,0 +1,159 @@
+/*
+ * #%L
+ * ImgLib2: a general-purpose, multidimensional image processing library.
+ * %%
+ * Copyright (C) 2009 - 2016 Tobias Pietzsch, Stephan Preibisch, Stephan Saalfeld,
+ * John Bogovic, Albert Cardona, Barry DeZonia, Christian Dietz, Jan Funke,
+ * Aivar Grislis, Jonathan Hale, Grant Harris, Stefan Helfrich, Mark Hiner,
+ * Martin Horn, Steffen Jaensch, Lee Kamentsky, Larry Lindsey, Melissa Linkert,
+ * Mark Longair, Brian Northan, Nick Perry, Curtis Rueden, Johannes Schindelin,
+ * Jean-Yves Tinevez and Michael Zinsmaier.
+ * %%
+ * Redistribution and use in source and binary forms, with or without
+ * modification, are permitted provided that the following conditions are met:
+ *
+ * 1. Redistributions of source code must retain the above copyright notice,
+ *    this list of conditions and the following disclaimer.
+ * 2. Redistributions in binary form must reproduce the above copyright notice,
+ *    this list of conditions and the following disclaimer in the documentation
+ *    and/or other materials provided with the distribution.
+ *
+ * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+ * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+ * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+ * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
+ * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+ * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
+ * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
+ * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
+ * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
+ * POSSIBILITY OF SUCH DAMAGE.
+ * #L%
+ */
+package net.imglib2.util;
+
+import java.text.DecimalFormat;
+
+/**
+ * Utility class to measure time differences in nano-seconds, based on
+ * {@link System#nanoTime()}. It compensates glitches in
+ * {@link System#nanoTime()}, such that the stop time can never be earlier than
+ * the start time. (For example, see
+ * <a href="http://stackoverflow.com/a/8854104">stackoverflow</a>)
+ *
+ * @author Tobias Pietzsch
+ */
+public class StopWatch {
+
+	private long time;
+
+	private long total;
+
+	private long started;
+
+	private boolean running;
+
+	/**
+	 * Use {@link #createStopped()} or {@link #createAndStart()} to create a StopWatch.
+	 * This constructor will also create a StopWatch, just like {@link #createStopped()},
+	 * but the more expressively named factory methods are preferred.
+	 */
+	private StopWatch() {
+		time = System.nanoTime();
+		total = 0;
+		started = 0;
+		running = false;
+	}
+
+	/**
+	 * Construct new {@link StopWatch}. It is not running initially. Call
+	 * {@link #start()} to start timing.
+	 */
+	public static StopWatch createStopped() {
+		return new StopWatch();
+	}
+
+	/**
+	 * Construct and start a new {@link StopWatch}.
+	 */
+	public static StopWatch createAndStart() {
+		StopWatch sw = new StopWatch();
+		sw.start();
+		return sw;
+	}
+
+	private long safeNanos() {
+		final long t = System.nanoTime();
+		if (t > time)
+			time = t;
+		return time;
+	}
+
+	/**
+	 * Start the clock.
+	 */
+	public synchronized void start() {
+		if (running)
+			stop();
+		started = safeNanos();
+		running = true;
+	}
+
+	/**
+	 * Stop the clock.
+	 */
+	public synchronized void stop() {
+		if (running)
+			total += safeNanos() - started;
+		running = false;
+	}
+
+	/**
+	 * Get the total time the clock was running, in nano-seconds. Note that the
+	 * clock can be started and stopped multiple times, accumulating the time
+	 * intervals it was running in between.
+	 *
+	 * @return the total time the clock was running, in nano-seconds.
+	 */
+	public synchronized long nanoTime() {
+		if (running)
+			return total + safeNanos() - started;
+		else
+			return total;
+	}
+
+	/**
+	 * Get the total time the clock was running in seconds. Note that the
+	 * clock can be started and stopped multiple times, accumulating the time
+	 * intervals it was running in between.
+	 */
+	public double seconds() {
+		return nanoTime() * 1e-9;
+	}
+
+	/**
+	 * Get the total time the clock was running as string. Note that the
+	 * clock can be started and stopped multiple times, accumulating the time
+	 * intervals it was running in between.
+	 */
+	@Override
+	public String toString()
+	{
+		return secondsToString( seconds() );
+	}
+
+	private static DecimalFormat format = new DecimalFormat("#0.000");
+
+	public static String secondsToString( double seconds )
+	{
+		double abs = Math.abs( seconds );
+		if ( abs < 1e-6 )
+			return format.format( seconds * 1e9 ) + " ns";
+		if ( abs < 1e-3 )
+			return format.format( seconds * 1e6 ) + " \u00b5s";
+		if ( abs < 1 )
+			return format.format( seconds * 1e3 )+ " ms";
+		return format.format( seconds ) + " s";
+	}
+}

src/test/java/net/imglib2/util/StopWatchTest.java

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+package net.imglib2.util;
+
+import org.junit.Ignore;
+import org.junit.Test;
+
+import static org.junit.Assert.assertEquals;
+
+public class StopWatchTest
+{
+	@Ignore // NB: This is not a test. But it's a short demo how StopWatch could be used during debugging.
+	@Test
+	public void demo() throws InterruptedException
+	{
+		StopWatch sw = StopWatch.createAndStart();
+		Thread.sleep( 42 );
+		System.out.println( sw );
+	}
+
+	@Ignore // NB: Time measurement depends on side effects. The test might sometimes fail. Better ignore to avoid confusion.
+	@Test
+	public void testCreateAndStart() throws InterruptedException
+	{
+		StopWatch sw = StopWatch.createAndStart();
+		Thread.sleep( 42 );
+		long nanoTime = sw.nanoTime();
+		assertEquals( 42e6, nanoTime, 1e6);
+	}
+
+	@Ignore // NB: Time measurement depends on side effects. The test might sometimes fail. Better ignore it to avoid confusion.
+	@Test
+	public void testStartStop() throws InterruptedException
+	{
+		StopWatch sw = StopWatch.createStopped();
+		Thread.sleep( 10 );
+		sw.start();
+		Thread.sleep( 10 );
+		sw.stop();
+		Thread.sleep( 10 );
+		long nanoTime = sw.nanoTime();
+		assertEquals( 10e6, nanoTime, 1e6);
+	}
+
+	@Ignore // NB: Time measurement depends on side effects. The test might sometimes fail. Better ignore it to avoid confusion.
+	@Test
+	public void testSeconds() throws InterruptedException
+	{
+		StopWatch sw = StopWatch.createAndStart();
+		Thread.sleep( 42 );
+		double time = sw.seconds();
+		assertEquals( 0.042, time, 0.010);
+	}
+
+	@Test
+	public void testSecondsToString() {
+		assertEquals("42.000 s", StopWatch.secondsToString(42));
+		assertEquals("42.000 ms", StopWatch.secondsToString(42e-3));
+		assertEquals("42.000 \u00b5s", StopWatch.secondsToString(42e-6));
+		assertEquals("42.000 ns", StopWatch.secondsToString(42e-9));
+		assertEquals("-42.000 ms", StopWatch.secondsToString(-42e-3));
+		assertEquals("42.000 s", StopWatch.secondsToString(42.00000000001));
+	}
+}