Skip to content

Releases: ihmpdcc/cutlass

v1.0.3

21 Feb 21:19
Compare
Choose a tag to compare
  • Support for preg_term and ga_at_delivery fields in SubjectAttribute.

v1.0.2

18 Feb 23:25
Compare
Choose a tag to compare
  • Support for subproject in VisitAttribute, SubjectAttribute and SampleAttribute classes.
  • Support for sample_desc and sample_type properties in the SampleAttribute class.
  • Support for the int_sample_id property in the Sample class.
  • Some linting issues corrected per pylint.

v1.0.1

26 Jan 23:22
Compare
Choose a tag to compare
  • Support for mother_child, and time_during_pregnancy properties in VisitAttribute.
  • Minor pylint issues corrected with VisitAttribute class.

v1.0.0

18 Dec 22:39
Compare
Choose a tag to compare
  • Added serology, host_epigenetics_raw_seq_set and host_variant_call nodes, tests, and examples.
  • Removed obsolete rand_generator function from some files.
  • Addressed many linting issues identified by pylint.
  • Numerous documentation/pydoc improvements.

v0.30

11 Sep 15:37
Compare
Choose a tag to compare
  • Support for the ProteomeNonPride node type.
  • Numerous formatting and other changes identified by pylint corrected.
  • Merged PR #29 from @carze fixing the handling of optional properties in the VisitAttribute class.
  • Some pyunit test scripts improved to reduce code duplication with use of testing utilities.

v0.29

03 Mar 14:24
Compare
Choose a tag to compare
  • Added missing support for private data in several classes
    and added associated changes to examples and test scripts.
  • Negative size check for AbundanceMatrix.

v0.28

26 Jan 21:30
Compare
Choose a tag to compare
  • Added support for private data in nodes associated with files and file
    transfer, such as WgsRawSeqSet.
  • Missing example script for WgsRawSeqSet added.
  • Missing test script for HostTranscriptomicsRawSeqSet added.
  • New method for testing boolean properties in CutlassTestUtil class.

v0.27

18 Jan 06:36
Compare
Choose a tag to compare
  • Bug fix to SixteenSTrimmedSeqSet save() functionality which was losing the urls property.
  • Improved test for SixteenSTrimmedSeqSet class.
  • Added missing example script for SixteenSTrimmedSeqSet data.

v0.26

18 Jan 05:51
Compare
Choose a tag to compare
  • Added missing SubjectAttribute node, example and test.
  • Modified Subject node to add attributes() method for retrieval of SubjectAttribute information.
  • Modified Annotation class to require file size.
  • Removed WgsRawSeqSetPrivate class, test and example in favor of more generic solution.
  • Improved flexibility of test scripts by using a configuration file for OSDF settings.

v0.25

25 Oct 15:12
Compare
Choose a tag to compare
  • Removed some code duplication in Metabolome identified after an unrelated issue reported by @salinsde.