Initial repository setup #1
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| # ----------------------------------------------------------------------------- | |
| # - invoked on push, pull_request, or manual trigger | |
| # - test under all supported versions of Python (python_versions.json) | |
| # ----------------------------------------------------------------------------- | |
| name: build | |
| on: [push, pull_request, workflow_dispatch] | |
| jobs: | |
| get-python-versions: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v2 | |
| - name: Install jq | |
| run: sudo apt-get install jq | |
| - name: Get Python versions | |
| id: set-matrix | |
| run: | | |
| echo "MATRIX_RESULT=$(jq -c . python_versions.json)" >> $GITHUB_ENV | |
| outputs: | |
| matrix: ${{ env.MATRIX_RESULT }} | |
| build: | |
| needs: get-python-versions | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ${{ fromJSON(needs.get-python-versions.outputs.matrix) }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: get upstream branch name | |
| run: | | |
| if "${{ github.event_name == 'pull_request' }}" ; then | |
| echo "branch_name=${GITHUB_HEAD_REF}" >> $GITHUB_ENV | |
| else | |
| echo "branch_name=${GITHUB_REF_NAME}" >> $GITHUB_ENV | |
| fi | |
| - name: check for upstream vivarium | |
| run: | | |
| if git ls-remote --exit-code --heads https://github.com/ihmeuw/vivarium.git ${branch_name} == "0"; then | |
| echo "upstream_exist=true" >> $GITHUB_ENV | |
| else | |
| echo "upstream_exist=false" >> $GITHUB_ENV | |
| fi | |
| - name: check for upstream vivarium_public_health | |
| run: | | |
| if git ls-remote --exit-code --heads https://github.com/ihmeuw/vivarium_public_health.git ${branch_name} == "0"; then | |
| echo "upstream_exist=true" >> $GITHUB_ENV | |
| else | |
| echo "upstream_exist=false" >> $GITHUB_ENV | |
| fi | |
| - name: check for upstream vivarium_inputs | |
| run: | | |
| if git ls-remote --exit-code --heads https://github.com/ihmeuw/vivarium_inputs.git ${branch_name} == "0"; then | |
| echo "upstream_exist=true" >> $GITHUB_ENV | |
| else | |
| echo "upstream_exist=false" >> $GITHUB_ENV | |
| fi | |
| - name: print environment values | |
| run: | | |
| cat $GITHUB_ENV | |
| - name: Update pip | |
| run: | | |
| python -m pip install --upgrade pip | |
| - name: Retrieve upstream vivarium | |
| if: env.upstream_vivarium_exist == 'true' | |
| run: | | |
| echo "Cloning vivarium upstream branch: ${GITHUB_HEAD_REF}" | |
| pushd .. | |
| git clone --branch=${GITHUB_HEAD_REF} https://github.com/ihmeuw/vivarium.git | |
| pushd vivarium | |
| pip install . | |
| popd && popd | |
| - name: Retrieve upstream vivarium_public_health | |
| if: env.upstream_vivarium_public_health_exist == 'true' | |
| run: | | |
| echo "Cloning vivarium_public_health upstream branch: ${GITHUB_HEAD_REF}" | |
| pushd .. | |
| git clone --branch=${GITHUB_HEAD_REF} https://github.com/ihmeuw/vivarium_public_health.git | |
| pushd vivarium_public_health | |
| pip install . | |
| popd && popd | |
| - name: Retrieve upstream vivarium_inputs | |
| if: env.upstream_vivarium_inputs_exist == 'true' | |
| run: | | |
| echo "Cloning upstream vivarium_inputs branch: ${GITHUB_HEAD_REF}" | |
| pushd .. | |
| git clone --branch=${GITHUB_HEAD_REF} https://github.com/ihmeuw/vivarium_inputs.git | |
| pushd vivarium_inputs | |
| pip install . | |
| popd && popd | |
| - name: Install dependencies | |
| run: | | |
| pip install .[test] | |
| - name: Lint | |
| run: | | |
| pip install black==22.3.0 isort | |
| isort . --check -v | |
| black . --check -v | |
| - name: Test | |
| run: | | |
| pytest ./tests |