ci: Sync workflows #4417
Workflow file for this run
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| # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag. | ||
| # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions | ||
| on: | ||
| push: | ||
| branches: | ||
| - main | ||
| - fix/* | ||
| pull_request: | ||
| branches: | ||
| - main | ||
| - fix/* | ||
| schedule: | ||
| - cron: '0 2 * * *' | ||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.ref }}-${{ github.head_ref || github.sha }}-${{ github.base_ref || '' }} | ||
| cancel-in-progress: true | ||
| name: R-CMD-check-extra | ||
| jobs: | ||
| coverage: | ||
|
Check failure on line 22 in .github/workflows/build-and-check.yml
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||
| runs-on: ubuntu-20.04 | ||
| needs: build_src_package | ||
| name: Coverage | ||
| env: | ||
| RSPM: https://packagemanager.rstudio.com/cran/__linux__/focal/latest | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| MAKEFLAGS: -j2 | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| with: | ||
| fetch-depth: 0 | ||
| - name: apt update | ||
| run: | | ||
| sudo apt-get update | ||
| sudo apt-get install -y libarpack2-dev | ||
| shell: bash | ||
| - name: Setup R | ||
| uses: r-lib/actions/setup-r@v2 | ||
| - name: Setup Pandoc | ||
| uses: r-lib/actions/setup-pandoc@v2 | ||
| - name: Install R dependencies | ||
| uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| needs: coverage | ||
| pak-version: devel | ||
| - name: Run coverage | ||
| run: | | ||
| line_exclusions <- fs::dir_ls(c("src/vendor"), type = "file", recurse = TRUE) | ||
| cov <- covr::package_coverage( | ||
| type = c("tests", "examples"), | ||
| line_exclusions = as.list(names(line_exclusions)), | ||
| quiet = FALSE, | ||
| install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | ||
| ) | ||
| covr::to_cobertura(cov) | ||
| shell: Rscript {0} | ||
| - uses: codecov/codecov-action@v4 | ||
| with: | ||
| fail_ci_if_error: ${{ github.event_name != 'pull_request' && true || false }} | ||
| file: ./cobertura.xml | ||
| plugin: noop | ||
| disable_search: true | ||
| token: ${{ secrets.CODECOV_TOKEN }} | ||
| sanitizer: | ||
| runs-on: ubuntu-22.04 | ||
| needs: build_src_package | ||
| name: Sanitizer | ||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| with: | ||
| fetch-depth: 0 | ||
| - name: apt update | ||
| run: | | ||
| sudo apt-get update | ||
| sudo apt-get install -y libarpack2-dev | ||
| shell: bash | ||
| - name: run sanitizer | ||
| uses: addnab/docker-run-action@v3 | ||
| with: | ||
| image: ghcr.io/krlmlr/rigraph-san:main | ||
| options: --rm --platform linux/amd64 -v ${{ github.workspace }}:/rigraph | ||
| run: | | ||
| set -e | ||
| printenv | ||
| # Memory leaks with rgl 1.3.12, https://github.com/dmurdoch/rgl/issues/439 | ||
| RDcsan -e 'pak::pak("dmurdoch/rgl")' | ||
| cd rigraph | ||
| RDcsan CMD INSTALL . --no-byte-compile | ||
| TESTTHAT_PARALLEL=false CI=true RDcsan -q -e 'testthat::test_local(reporter = c("location", "summary"), load_package = "installed")' | ||
