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Robot Updated at:17 Aug 2024 21:09:06 GMT
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2 changes: 1 addition & 1 deletion docs/awesome/awesome-agi-cocosci.md
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* [Anomaly detection through explanations](https://dspace.mit.edu/handle/1721.1/129250) - ***Ph.D Dissertation MIT***, 2018. [[All Versions](https://scholar.google.com/scholar?hl=en&as_sdt=0%2C5&q=Anomaly+detection+through+explanations&btnG=)]. An application of abduction in anomaly detection.

* [Automated Biodesign Engineering by Abductive Meta-Interpretive Learning](https://arxiv.org/abs/2105.07758) - ***AAAI Spring Symposium Series 2021 on Artificial Intelligence for Synthetic Biology***, 2021. [[All Versions](https://scholar.google.com/scholar?cluster=543730388062329581&as_sdt=0,5)]. This work proposes an automated biodesign engineering framework empowered by Abductive Meta-Interpretive Learning (MetaAbd), a novel machine learning approach that combines symbolic and sub-symbolic machine learning, to further enhance the design-build-test-learn cycle by enabling the learning machine to 1) exploit domain knowledge and learn human-interpretable models that are expressed by formal languages such as first-order logic; 2) simultaneously optimise the structure and parameters of the models to make accurate numerical predictions; 3) reduce the cost of experiments and effort on data annotation by actively generating hypotheses and examples.
* [Automated Biodesign Engineering by Abductive Meta-Interpretive Learning](https://arxiv.org/abs/2105.07758) - ***AAAI Spring Symposium Series 2021 on Artificial Intelligence for Synthetic Biology***, 2021. [[All Versions](https://scholar.google.com/scholar?cluster=543730388062329581)]. This work proposes an automated biodesign engineering framework empowered by Abductive Meta-Interpretive Learning (MetaAbd), a novel machine learning approach that combines symbolic and sub-symbolic machine learning, to further enhance the design-build-test-learn cycle by enabling the learning machine to 1) exploit domain knowledge and learn human-interpretable models that are expressed by formal languages such as first-order logic; 2) simultaneously optimise the structure and parameters of the models to make accurate numerical predictions; 3) reduce the cost of experiments and effort on data annotation by actively generating hypotheses and examples.

* [Human Comprehensible Active Learning of Genome-Scale Metabolic Networks](https://arxiv.org/abs/2308.12740) - ***AAAI Spring Symposium Series 2023 on Computational Scientific Discovery***, 2023. [[All Versions](https://scholar.google.com/scholar?oi=bibs&cluster=10875437066608527790)]. [[Extended Abstract](http://cogsys.org/symposium/discovery-2023/abstracts/Abstract_3169.pdf)]. [[Slides](http://cogsys.org/symposium/discovery-2023/talks/Ai.pdf)]. This work introduces a novel machine learning framework ILP-iML1515 based on Inductive Logic Programming (ILP) that performs abductive logical reasoning and actively learns from training examples. The ILP-iML1515 framework 1) allows high-throughput simulations and 2) actively selects experiments that reduce the experimental cost of learning gene functions in comparison to randomly selected experiments.

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5 changes: 4 additions & 1 deletion docs/awesome/awesome-angular.md
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#### Internationalization

* [transloco](https://github.com/ngneat/transloco) - 🚀 😍 The internationalization (i18n) library for Angular.
* [transloco](https://github.com/jsverse/transloco/) - 🚀 😍 The internationalization (i18n) library for Angular.
* [transloco-keys-manager](https://github.com/jsverse/transloco-keys-manager) - Tools to help reduce monotonous work.
* [ngx-tolgee](https://github.com/tolgee/tolgee-js/tree/main/packages/ngx/projects/ngx-tolgee) - Web-based localization tool enabling users to translate directly in the Angular app they develop.
* [typesafe-i18n](https://github.com/ivanhofer/typesafe-i18n) - A fully type-safe and lightweight internationalization library for all your TypeScript and JavaScript projects.
* [angular-l10n](https://github.com/robisim74/angular-l10n) - Angular library to translate texts, dates and numbers.
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* [ngx-tiptap](https://github.com/sibiraj-s/ngx-tiptap) - Angular bindings for [tiptap v2](https://tiptap.dev/).
* [tinymce-angular](https://github.com/tinymce/tinymce-angular) - Official [TinyMCE](https://www.tiny.cloud/) Angular Component.
* [slate-angular](https://github.com/worktile/slate-angular) - Angular view layer for [Slate](https://github.com/ianstormtaylor/slate).
* [BlockNoteAngular](https://github.com/dytab/BlockNoteAngular) - Unofficial [BlockNote](https://github.com/TypeCellOS/BlockNote) Angular wrapper.
* [ngx-jodit](https://github.com/julianpoemp/ngx-jodit/) - Angular wrapper for [Jodit](https://github.com/xdan/jodit) WYSIWYG editor.

#### File Upload

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56 changes: 28 additions & 28 deletions docs/awesome/awesome-browser-extensions-for-github.md
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Shows notifications when you get a new notification on GitHub and provides quick access to all notifications in a popup.

Installs: 113 | Stars: 79 | Last update: 2 Jun 2023
Installs: 114 | Stars: 79 | Last update: 2 Jun 2023


Removes clutter from your pull request by automatically marking as viewed files that aren't worth reviewing.
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Displays size of each file, download link and an option of copying file contents directly to clipboard

Installs: 627 | Stars: 2070 | Last update: 3 Jun 2024
Installs: 631 | Stars: 2070 | Last update: 3 Jun 2024


Easily search GIPHY to add a GIF into any GitHub comment box.

Installs: 521 | Stars: 184 | Last update: 18 Jan 2024
Installs: 531 | Stars: 184 | Last update: 18 Jan 2024


Find the best GIFs for your awesome pull requests.
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Quickly browse the history of a file from any git repository.

Installs: 193 | Stars: 13534 | Last update: 13 Oct 2023
Installs: 195 | Stars: 13534 | Last update: 13 Oct 2023


GitHub provides a page that only shows diffs with a .diff at the end of the URL of the pull request. This browser extension makes it easier to view csv diffs by using daff on that page.
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Code folding - the ability to selectively hide and display sections of a code - is an invaluable feature in many text editors and IDEs. Now, developers can utilize that same style code-folding while poring over source code on the web in GitHub. Works for any type of indentation- spaces or tabs.

Installs: 105 | Stars: 289 | Last update: 25 Apr 2024
Installs: 106 | Stars: 289 | Last update: 25 Apr 2024


Set custom tab size for code view on GitHub.com
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Neat hovercards for GitHub.

Installs: 18627 | Stars: 1822 | Last update: n/a
Installs: 18629 | Stars: 1822 | Last update: n/a


Colorize issue and PR links to see their status (open, closed, merged).

Installs: 92 | Stars: 298 | Last update: 30 Jun 2024
Installs: 93 | Stars: 299 | Last update: 30 Jun 2024


Displays npm package stats on GitHub
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Lists repositories that are similar to the one being viewed

Installs: 28 | Stars: 49 | Last update: 10 Aug 2022
Installs: 29 | Stars: 49 | Last update: 10 Aug 2022


Revert closed GitHub issues from purple back to red
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Generates a pie chart on user profile pages displaying a breakdown of what languages they have used in their repositories.

Installs: 40 | Stars: 47 | Last update: 25 Sep 2023
Installs: 41 | Stars: 47 | Last update: 25 Sep 2023


This extension adds the simplicity of WYSIWYG editing to issues, comments, pull requests, wikis and discussions in GitHub. It accepts Markdown input and offers productive writing, starting with tables.

Installs: 113 | Stars: 379 | Last update: 10 Apr 2024
Installs: 116 | Stars: 379 | Last update: 10 Apr 2024


View and create Linear tickets from any GitHub PR or issue.
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It can make the sub-directories and files of github repository as zip and download it

Installs: 3383 | Stars: 38 | Last update: 21 Aug 2023
Installs: 3403 | Stars: 38 | Last update: 21 Aug 2023


Create, save, edit, pin, search and delete filters that you commonly use on the Github Issues and Pull Requests pages. You are able to scope filters to be shown globally (on each repo) or only have them show up on the repo you create them on. Pinning filters is also a feature that this extension allows you to do. So if you have several filters you use daily - you have a way to quickly access them, at the top of your list.
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Allows you to toggle between the normal GitHub contribution chart and an isometric pixel art version.

Installs: 10000 | Stars: 3485 | Last update: n/a
Installs: 10000 | Stars: 3486 | Last update: n/a


Browser extension to add git graph to GitHub website.

Installs: 452 | Stars: 3312 | Last update: 6 Aug 2024
Installs: 457 | Stars: 3310 | Last update: 6 Aug 2024


Chrome extension that adds a button in browser and links this button to a GitHub repository that you will configure, then on any webpage just click this extension button and it will add the given link with the title of the page in that repository.
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See forks with the most stars under the names of repositories.

Installs: 302 | Stars: 596 | Last update: 30 Mar 2024
Installs: 303 | Stars: 596 | Last update: 30 Mar 2024


Show Material icons for files/folders in repository file viewer. Display the same icons from vscode-material-icon-theme VSCode extension.

Installs: 792 | Stars: 491 | Last update: 11 Aug 2024
Installs: 800 | Stars: 491 | Last update: 11 Aug 2024


An extension that creates direct links to imported modules, external or internal, on source code on GitHub. Supports multiple languages, including common ones like Rust, Go, Python and Ruby, but also odd ones like Nim, Haskell, Julia and Elm.

Installs: 35 | Stars: 250 | Last update: 27 Nov 2019
Installs: 36 | Stars: 250 | Last update: 27 Nov 2019


Chrome extension which helps you not to miss important changes in your news thread related to your repo
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A Chrome and Firefox extension to quickly see your notifications in a popup without leaving the current page.

Installs: 58 | Stars: 140 | Last update: 16 Aug 2024
Installs: 59 | Stars: 141 | Last update: 16 Aug 2024


Displays your GitHub notifications unread count. Supports GitHub Enterprise and an option to only show unread count for issues you're participating in. You can click the icon to quickly see your unread notifications.

Installs: 524 | Stars: 1821 | Last update: 24 Apr 2024
Installs: 532 | Stars: 1821 | Last update: 24 Apr 2024


Filter your pull requests/issues in different categories giving you a big boost in productivity. Also suggests new trending repositories.
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OctoLinker is the easiest and best way to navigate between files and projects on GitHub. It supports languages such as JavaScript, Ruby, Go, PHP, JAVA and more. It works with package.json as well as with Gemfiles.

Installs: 12903 | Stars: 5264 | Last update: 13 Nov 2022
Installs: 12908 | Stars: 5264 | Last update: 13 Nov 2022


OctoPermalinker is a browser extension that searches GitHub comments/files for links to files on branches, and adds a link to where the branch pointed when the comment/file was made/updated. This helps you avoid following a link that was broken after being posted. For context, here's some discussion about broken GitHub links: [Don't link to line numbers in GitHub](https://news.ycombinator.com/item?id=8046710).
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Useful for developers who frequently read source in GitHub and do not want to download or checkout too many repositories.

Installs: 37161 | Stars: 22749 | Last update: 9 Jun 2024
Installs: 37218 | Stars: 22751 | Last update: 9 Jun 2024


Revert GitHub's UI back to its classic look (before the June 23, 2020 update that has a flat, rounded and more whitespaced design).
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This browser extension allows you to open files in your IDE directly from GitHub, assuming the repository you are working on is cloned on your computer. When a fragment of a file is displayed, your IDE opens the file and puts the cursor at the desired line.

Installs: 34 | Stars: 71 | Last update: 23 Sep 2023
Installs: 35 | Stars: 71 | Last update: 23 Sep 2023


Helps you keep track of incoming and outgoing PRs, and notifies you when you receive a pull request on GitHub.

Installs: 33 | Stars: 117 | Last update: 21 Jun 2023
Installs: 34 | Stars: 117 | Last update: 21 Jun 2023


Browser extension that shows which pull requests contain changes related to a file.
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Extension that simplifies the GitHub interface and adds useful features.

Installs: 8235 | Stars: 24013 | Last update: 13 Aug 2024
Installs: 8320 | Stars: 24017 | Last update: 13 Aug 2024


Are they tabs? Are they spaces? How many? Never wonder again! Renders spaces as `·` and tabs as `` in all the code on GitHub.

Installs: 21 | Stars: 76 | Last update: 25 Apr 2024
Installs: 22 | Stars: 76 | Last update: 25 Apr 2024


Introduces the Explore tab in the pull request interface where you can review changes ordered by importance and see the semantic context surrounding each change.
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4. Hover tooltips
5. File tree navigation

Installs: 840 | Stars: 10027 | Last update: 14 Apr 2023
Installs: 854 | Stars: 10029 | Last update: 14 Apr 2023


Make tab indented code more readable by forcing the tab size to 4 instead of 8.
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All your issues, PRs, repos and other work documents right in your new tab

Installs: 114 | Stars: n/a | Last update: n/a
Installs: 117 | Stars: n/a | Last update: n/a


file tree for github, and more than that.

Installs: 300 | Stars: n/a | Last update: 7 Jul 2024
Installs: 303 | Stars: n/a | Last update: 7 Jul 2024


Add breakpoints at 1400px, 1600px and 1800px for full GitHub experience on large screens. Also removes the truncating of file and directory names in the repository browser.
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gitpod streamlines developer workflows by providing ready-to-code development environments in your browser - powered by vs code.

Installs: 2293 | Stars: 143 | Last update: 21 Jun 2024
Installs: 2317 | Stars: 143 | Last update: 21 Jun 2024


When viewing a repository on github.com that has a package.json file, this extension will introspect the dependencies in package.json and display links and description for each dependency, just below the repo's README.
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### Automation
- [Puppeteer IDE](https://github.com/gajananpp/puppeteer-ide-extension) - Standalone Puppeteer playground in browser's developer tools.
- [k6 browser](https://github.com/grafana/xk6-browser) - Browser automation and end-to-end web testing tool that interacts with browsers and collects frontend performance metrics.

## Alumni
Old projects, likely not maintained any longer… But still cool.
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Expand Up @@ -2045,6 +2045,7 @@ _Libraries that are used to help make your application more secure._
- [goSecretBoxPassword](https://github.com/dwin/goSecretBoxPassword) - A probably paranoid package for securely hashing and encrypting passwords.
- [Interpol](https://github.com/avahidi/interpol) - Rule-based data generator for fuzzing and penetration testing.
- [lego](https://github.com/go-acme/lego) - Pure Go ACME client library and CLI tool (for use with Let's Encrypt).
- [luks.go](https://github.com/anatol/luks.go) - Pure Golang library to manage LUKS partitions.
- [memguard](https://github.com/awnumar/memguard) - A pure Go library for handling sensitive values in memory.
- [multikey](https://github.com/adrianosela/multikey) - An n-out-of-N keys encryption/decryption framework based on Shamir's Secret Sharing algorithm.
- [nacl](https://github.com/kevinburke/nacl) - Go implementation of the NaCL set of API's.
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1 change: 1 addition & 0 deletions docs/awesome/awesome-parasite.md
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* [Denver Museum of Nature and Science](https://science.dmns.org/integrative-collections/dmns-zoology-collections/) - Collection of mammalian ecto- and endo- parasites primarily focused on the Rocky Mountain and Great Plains regions of the United States. Accessible through [Arctos](http://arctos.database.museum/SpecimenSearch.cfm).
* [Harold W. Manter Laboratory of Parasitology Collection](http://hwml.unl.edu/resources/database-68) - Specimen collection focused "on the helminth parasites of mammals of the Nearctic and Neotropical regions stressing studies of the phylogeny and diversity of parasites of Rodentia, Marsupialia, Xenarthra, and Chiroptera." The archive site for the [American Society of Parasitologists](https://www.amsocparasit.org/). Accessible through [Arctos](http://arctos.database.museum/SpecimenSearch.cfm).
* [Invertebrates Collection of the Swedish Museum of Natural History](https://www.nrm.se/english/researchandcollections/zoology/collections/invertebrates.305_en.html) - Swedish Museum with collection of >10,000 flatworms, >2,000 nematodes, and select other parasite groups. Accessible through [GBIF](https://www.gbif.org/dataset/56aa0680-0c60-11dd-84cd-b8a03c50a862).
* [Invertebrate Zoology collection of the Museum of Texas Tech University](https://www.depts.ttu.edu/nsrl/collections/Invertebrate_Zoology/index.php) - Previously the Medical Zoology Collection, a portion of this collection includs endo- and ecto-parasites of medical and veterinary importance. Accessible through [GBIF](https://www.gbif.org/dataset/13fdfab7-e281-428d-8c1f-e72eb7398e97).
* [Meguro Parasite Museum](https://www.kiseichu.org/e-top) - Museum in Tokyo, Japan focused on human parasites with over 60,000 specimens. Data is not digitized, though the museum's founder, Dr. S. Yamaguti, described many of the specimens in 10 volumes of [Systema Helminthum](https://www.worldcat.org/title/systema-helminthum/oclc/427905372/editions?editionsView=true&referer=br). Collections primarily from Japan, Indonesia and Hawaii.
* [Muséum National d'Histoire Naturelle (MNHN - Paris)](https://www.mnhn.fr/en/collections/collection-groups/marine-invertebrates/parasitic-worms-helminths) - Helminth collection with more than 30,000 occurences of helminths with particular focus in tropical regions. Accessible through [GBIF](https://www.gbif.org/dataset/e0ebf2a1-3656-468a-b0b6-1aa93ff43fef#description).
* [Museum of Southwestern Biology, Division of Parasites](https://msb.unm.edu/divisions/parasites/index.html) - Specimen collection of parasites amphibians, reptiles, birds, and mammals. Particular focus on parasites of small mammals in high altidude locations and Sevilleta Long Term Ecological Research Station in New Mexico, and parasites of seabirds in the artic and Antartica. Accessible through [Arctos](http://arctos.database.museum/SpecimenSearch.cfm).
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