Automated deployment to update versions 2024-10-27

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hpc-social · Oct 27, 2024 · e4a849e · e4a849e
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diff --git a/.github/empty.txt b/.github/empty.txt
diff --git a/.github/repos.txt b/.github/repos.txt
diff --git a/docs/_issues/2017-12-15-sxs-collaboration-spectre-462.md b/docs/_issues/2017-12-15-sxs-collaboration-spectre-462.md
diff --git a/docs/_issues/2018-06-19-sxs-collaboration-spectre-769.md b/docs/_issues/2018-06-19-sxs-collaboration-spectre-769.md
diff --git a/docs/_issues/2018-09-16-sxs-collaboration-spectre-947.md b/docs/_issues/2018-09-16-sxs-collaboration-spectre-947.md
diff --git a/docs/_issues/2018-11-27-sxs-collaboration-spectre-1200.md b/docs/_issues/2018-11-27-sxs-collaboration-spectre-1200.md
diff --git a/docs/_issues/2019-01-30-sxs-collaboration-spectre-1303.md b/docs/_issues/2019-01-30-sxs-collaboration-spectre-1303.md
diff --git a/docs/_issues/2019-07-17-pandas-dev-pandas-27437.md b/docs/_issues/2019-07-17-pandas-dev-pandas-27437.md
diff --git a/docs/_issues/2019-12-26-jupyterlab-jupyterlab-7702.md b/docs/_issues/2019-12-26-jupyterlab-jupyterlab-7702.md
@@ -0,0 +1,8 @@
+---
+tags: ["enhancement","jupyter","jupyterlab","pkgshortcuts","tagKeyboard"]
+title: "multi-key shortcuts with different modifiers in each don't work"
+html_url: "https://github.com/jupyterlab/jupyterlab/issues/7702"
+user: "amosbird"
+repo: "jupyterlab/jupyterlab"
+---
+
diff --git a/docs/_issues/2020-02-10-icesat2py-icepyx-15.md b/docs/_issues/2020-02-10-icesat2py-icepyx-15.md
@@ -1,6 +1,6 @@
 ---
 tags: ["closember","community-driven","enhancement","hacktoberfest","icesat-2","python3"]
-title: "interacting with the file system"
+title: "interacting with the file system using pathlib instead of os.path"
 html_url: "https://github.com/icesat2py/icepyx/issues/15"
 user: "JessicaS11"
 repo: "icesat2py/icepyx"

diff --git a/docs/_issues/2020-11-11-matplotlib-matplotlib-18931.md b/docs/_issues/2020-11-11-matplotlib-matplotlib-18931.md
@@ -0,0 +1,8 @@
+---
+tags: ["Difficulty-Medium","Good-first-issue","data-science","data-visualization","gtk","matplotlib","plotting","python","qt","tk","topic-mplot3d","wx"]
+title: "3D collections do not proper handle `edgecolor='face'`"
+html_url: "https://github.com/matplotlib/matplotlib/issues/18931"
+user: "tacaswell"
+repo: "matplotlib/matplotlib"
+---
+
diff --git a/docs/_issues/2020-12-14-sxs-collaboration-spectre-2652.md b/docs/_issues/2020-12-14-sxs-collaboration-spectre-2652.md
diff --git a/docs/_issues/2020-12-21-sxs-collaboration-spectre-2697.md b/docs/_issues/2020-12-21-sxs-collaboration-spectre-2697.md
diff --git a/docs/_issues/2021-02-10-sxs-collaboration-spectre-2871.md b/docs/_issues/2021-02-10-sxs-collaboration-spectre-2871.md
diff --git a/docs/_issues/2021-03-01-sxs-collaboration-spectre-2934.md b/docs/_issues/2021-03-01-sxs-collaboration-spectre-2934.md
diff --git a/docs/_issues/2022-11-15-sxs-collaboration-spectre-4382.md b/docs/_issues/2022-11-15-sxs-collaboration-spectre-4382.md
diff --git a/docs/_issues/2022-12-14-sxs-collaboration-spectre-4515.md b/docs/_issues/2022-12-14-sxs-collaboration-spectre-4515.md
diff --git a/docs/_issues/2023-09-15-sxs-collaboration-spectre-5457.md b/docs/_issues/2023-09-15-sxs-collaboration-spectre-5457.md
diff --git a/docs/_issues/2023-09-15-sxs-collaboration-spectre-5463.md b/docs/_issues/2023-09-15-sxs-collaboration-spectre-5463.md
diff --git a/docs/_issues/2023-09-28-sxs-collaboration-spectre-5512.md b/docs/_issues/2023-09-28-sxs-collaboration-spectre-5512.md
diff --git a/docs/_issues/2024-04-23-sxs-collaboration-spectre-5938.md b/docs/_issues/2024-04-23-sxs-collaboration-spectre-5938.md
diff --git a/docs/_issues/2024-05-27-aiidateam-aiida-core-6421.md b/docs/_issues/2024-05-27-aiidateam-aiida-core-6421.md
@@ -1,5 +1,5 @@
 ---
-tags: ["aiida","computational-science","data-provenance","database","priority/nice-to-have","provenance","scheduler","ssh","type/usability","workflow","workflow-engine","workflows"]
+tags: ["aiida","computational-science","data-provenance","database","priority/nice-to-have","provenance","scheduler","ssh","topic/verdi","type/usability","workflow","workflow-engine","workflows"]
 title: "`verdi code export` does not return a message if successful"
 html_url: "https://github.com/aiidateam/aiida-core/issues/6421"
 user: "agoscinski"

diff --git a/docs/_issues/2024-05-27-aiidateam-aiida-core-6422.md b/docs/_issues/2024-05-27-aiidateam-aiida-core-6422.md
@@ -1,5 +1,5 @@
 ---
-tags: ["aiida","computational-science","data-provenance","database","priority/nice-to-have","provenance","scheduler","ssh","type/usability","workflow","workflow-engine","workflows"]
+tags: ["aiida","computational-science","data-provenance","database","priority/nice-to-have","provenance","scheduler","ssh","topic/verdi","type/usability","workflow","workflow-engine","workflows"]
 title: "More user friendly yes/no prompt in `verdi computer delete` "
 html_url: "https://github.com/aiidateam/aiida-core/issues/6422"
 user: "agoscinski"

diff --git a/docs/_issues/2024-06-05-pvlib-pvlib-python-2077.md b/docs/_issues/2024-06-05-pvlib-pvlib-python-2077.md
diff --git a/docs/_issues/2024-07-13-matplotlib-matplotlib-28570.md b/docs/_issues/2024-07-13-matplotlib-matplotlib-28570.md
diff --git a/docs/_issues/2024-09-14-mackelab-sbi-1278.md b/docs/_issues/2024-09-14-mackelab-sbi-1278.md
diff --git a/docs/_issues/2024-09-14-sbi-dev-sbi-1278.md b/docs/_issues/2024-09-14-sbi-dev-sbi-1278.md
diff --git a/docs/_issues/2024-10-05-vprusso-toqito-830.md b/docs/_issues/2024-10-05-vprusso-toqito-830.md
diff --git a/docs/_issues/2024-10-08-vprusso-toqito-844.md b/docs/_issues/2024-10-08-vprusso-toqito-844.md
diff --git a/docs/_issues/2024-10-15-jupyterlab-jupyterlab-16865.md b/docs/_issues/2024-10-15-jupyterlab-jupyterlab-16865.md
diff --git a/docs/_issues/2024-10-16-sxs-collaboration-spectre-6338.md b/docs/_issues/2024-10-16-sxs-collaboration-spectre-6338.md
diff --git a/docs/_issues/2024-10-17-TeamCOMPAS-COMPAS-1244.md b/docs/_issues/2024-10-17-TeamCOMPAS-COMPAS-1244.md
diff --git a/docs/_issues/2024-10-18-dask-dask-11447.md b/docs/_issues/2024-10-18-dask-dask-11447.md
@@ -0,0 +1,8 @@
+---
+tags: ["bug","dask","dataframe","numpy","pandas","pydata","python","scikit-learn","scipy"]
+title: "Dask.Visualize ignoring engine setting"
+html_url: "https://github.com/dask/dask/issues/11447"
+user: "frbelotto"
+repo: "dask/dask"
+---
+
diff --git a/docs/_issues/2024-10-19-xgi-org-xgi-602.md b/docs/_issues/2024-10-19-xgi-org-xgi-602.md
diff --git a/docs/_issues/2024-10-20-PennyLaneAI-catalyst-1220.md b/docs/_issues/2024-10-20-PennyLaneAI-catalyst-1220.md
@@ -0,0 +1,8 @@
+---
+tags: ["autodiff","automatic-differentiation","compiler","jax","jit","llvm","mlir","pennylane","python","qir","quantum","quantum-compiler","quantum-computing"]
+title: "Add merge rotation patterns for `qml.Rot` and `qml.CRot`"
+html_url: "https://github.com/PennyLaneAI/catalyst/issues/1220"
+user: "paul0403"
+repo: "PennyLaneAI/catalyst"
+---
+
diff --git a/docs/_issues/2024-10-20-xgi-org-xgi-606.md b/docs/_issues/2024-10-20-xgi-org-xgi-606.md
@@ -0,0 +1,8 @@
+---
+tags: ["higher-order","higher-order-networks","hypergraphs","improve","network-science"]
+title: "Rewrite the stats `tohist()` method"
+html_url: "https://github.com/xgi-org/xgi/issues/606"
+user: "nwlandry"
+repo: "xgi-org/xgi"
+---
+
diff --git a/docs/_issues/2024-10-21-tardis-sn-tardis-2863.md b/docs/_issues/2024-10-21-tardis-sn-tardis-2863.md
@@ -0,0 +1,8 @@
+---
+tags: ["astrophysics","easy","python","radiative-transfer","science","supernova"]
+title: "change M_PI to not use arccos"
+html_url: "https://github.com/tardis-sn/tardis/issues/2863"
+user: "wkerzendorf"
+repo: "tardis-sn/tardis"
+---
+
diff --git a/docs/_issues/2024-10-21-tardis-sn-tardis-2864.md b/docs/_issues/2024-10-21-tardis-sn-tardis-2864.md
@@ -0,0 +1,8 @@
+---
+tags: ["astrophysics","python","radiative-transfer","science","supernova"]
+title: "Change `expected` to `expected_fh` if it is a file handler"
+html_url: "https://github.com/tardis-sn/tardis/issues/2864"
+user: "atharva-2001"
+repo: "tardis-sn/tardis"
+---
+
diff --git a/docs/_issues/2024-10-22-pandas-dev-pandas-60084.md b/docs/_issues/2024-10-22-pandas-dev-pandas-60084.md
@@ -0,0 +1,8 @@
+---
+tags: ["Bug","Needs-Tests","Timestamp","alignment","data-analysis","data-science","flexible","hashing","pandas","python"]
+title: "BUG: arithmetic can break equality-hash invariant for Timestamp during DST transition"
+html_url: "https://github.com/pandas-dev/pandas/issues/60084"
+user: "Kxnr"
+repo: "pandas-dev/pandas"
+---
+
diff --git a/docs/_issues/2024-10-22-smith-chem-wisc-MetaMorpheus-2428.md b/docs/_issues/2024-10-22-smith-chem-wisc-MetaMorpheus-2428.md
@@ -0,0 +1,8 @@
+---
+tags: ["Bug","calibration","database-search","discovery","mass-match","proteome","proteomics-database-search","ptm","spectra","uniprot"]
+title: "Repeated analysis duplicates auto generated manuscript prose"
+html_url: "https://github.com/smith-chem-wisc/MetaMorpheus/issues/2428"
+user: "nbollis"
+repo: "smith-chem-wisc/MetaMorpheus"
+---
+
diff --git a/docs/_issues/2024-10-23-KingsburyLab-pyEQL-195.md b/docs/_issues/2024-10-23-KingsburyLab-pyEQL-195.md
@@ -0,0 +1,8 @@
+---
+tags: ["Good-First-Issue","docs"]
+title: "Documentation: minor fixes"
+html_url: "https://github.com/KingsburyLab/pyEQL/issues/195"
+user: "rkingsbury"
+repo: "KingsburyLab/pyEQL"
+---
+
diff --git a/docs/_issues/2024-10-24-xgi-org-xgi-610.md b/docs/_issues/2024-10-24-xgi-org-xgi-610.md
@@ -0,0 +1,8 @@
+---
+tags: ["documentation","higher-order","higher-order-networks","hypergraphs","network-science"]
+title: "add examples to Gallery"
+html_url: "https://github.com/xgi-org/xgi/issues/610"
+user: "maximelucas"
+repo: "xgi-org/xgi"
+---
+
diff --git a/docs/_issues/2024-10-25-TeamCOMPAS-COMPAS-1254.md b/docs/_issues/2024-10-25-TeamCOMPAS-COMPAS-1254.md
@@ -0,0 +1,7 @@
+---
+title: "Some Typos"
+html_url: "https://github.com/TeamCOMPAS/COMPAS/issues/1254"
+user: "dumbscholar"
+repo: "TeamCOMPAS/COMPAS"
+---
+
diff --git a/docs/_issues/2024-10-26-scipy-scipy-21759.md b/docs/_issues/2024-10-26-scipy-scipy-21759.md
@@ -0,0 +1,8 @@
+---
+tags: ["algorithms","closember","deprecated","python","scientific-computing","scipy","scipy.special"]
+title: "DEP: remove `special.btdtr` and `special.btdtri`"
+html_url: "https://github.com/scipy/scipy/issues/21759"
+user: "dschmitz89"
+repo: "scipy/scipy"
+---
+