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Question about pyscenic run time and memory usage, and potential updates to workflow?
#130
opened Jun 1, 2024 by
liezeltamon
add a lesson on GEO submissions
category-research
questions about analysis, how to do something in this particular case
subcategory-general_ngs
documents related to NGS technology but not to specific protocols already listed
#104
opened Jun 14, 2019 by
mistrm82
Reduce time for single cell markers visualization
category-research
questions about analysis, how to do something in this particular case
docs
issues related to knowledgebase docs
subcategory-scrnaseq
single cell RNAseq pipeline
#93
opened Mar 8, 2019 by
lpantano
single cell materials - tutorials, templates and scripts
category-research
questions about analysis, how to do something in this particular case
subcategory-scrnaseq
single cell RNAseq pipeline
#73
opened Oct 18, 2018 by
marypiper
How to get access to and download data from dbGap
docs
issues related to knowledgebase docs
#28
opened Aug 8, 2018 by
sjhosui
Example Cell Ranger load scripts
docs
issues related to knowledgebase docs
subcategory-scrnaseq
single cell RNAseq pipeline
urgent
issues to solve as soon as possible
#25
opened Aug 3, 2018 by
mjsteinbaugh
Arranging multidimensional data along a 2d curve
subcategory-rnaseq
issues related to RNAseq pipeline
subcategory-scrnaseq
single cell RNAseq pipeline
#23
opened Aug 3, 2018 by
roryk
Spacemacs (emacs/vim) setup
category-computing
documents related to software administration, tools usage, tips and tricks
subcategory-tips and tricks
documents related to tips and tricks for code
#22
opened Aug 3, 2018 by
roryk
Add genome usage information
category-research
questions about analysis, how to do something in this particular case
#20
opened Aug 3, 2018 by
vbarrera
normalized counts saved by bcbioRNAseq
feature request
request feature for any internal tool we use
subcategory-rnaseq
issues related to RNAseq pipeline
#12
opened Jul 27, 2018 by
rkhetani
IRFinder
feature request
request feature for any internal tool we use
subcategory-rnaseq
issues related to RNAseq pipeline
#10
opened Jul 27, 2018 by
roryk
Tryout Alevin for single-cell counting
feature request
request feature for any internal tool we use
subcategory-scrnaseq
single cell RNAseq pipeline
#9
opened Jul 27, 2018 by
roryk
ProTip!
Find all open issues with in progress development work with linked:pr.