ICGC DCC - Import

Parent project of the importer modules.

The Import project import reference data, which is used by the DCC ETL project, into MongoDB.

Build

To compile, test and package the system, execute the following from the root of the repository:

mvn

Modules

The Import system is comprised of the following modules.

Common

This module is the shared understanding of the system.

• Core

Client

This is the main entry point of the application.

• Client

Sources

These modules import various data sources.

Gene Model

• Gene

Gene Sets

• Gene Set
• CGC
• GO
• Drug
• Pathway

Other

• Diagram
• Project

Resources

For information on static resources used by this project, see RESOURCES.md.

Installation

For automated deployment and installation of the infrastructure and software components, please consult the dcc-cm project.

Changes

Change log for the user-facing system modules may be found in CHANGES.md.

License

Copyright and license information may be found in LICENSE.md.