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Update README.md
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heliziii authored Aug 31, 2024
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Expand Up @@ -54,7 +54,7 @@ Additional parameters:
* **--min-mean-qual** : Threshold for average quality of read which is based on Illumina 1.8 Phred+33 quality score system (Default 30)
* **--max-tr-len** : Maximum length of TR that will be genotyped by LongTR (Default 1000)
* **--min-reads** : Minimum total reads required to genotype a locus (Default = 10)
* **--alignment-params a,b,c,d,e,f,g**: Custom alignment parameters. Numbers show log probabilities
* **--alignment-params a,b,c,d,e,f,g**: Custom sequence alignment parameters

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