skip TOF backprojections along LOR where the sum over TOF is zero (#104) #370
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Workflow to build the parallelproj C/CUDA libs (incl. installation of CUDA) | |
| name: Build C/python | |
| on: | |
| push: | |
| branches: [ "master" ] | |
| pull_request: | |
| branches: [ "master" ] | |
| paths-ignore: | |
| - 'README.md' | |
| - 'CHANGELOG.md' | |
| - 'docs/**' | |
| env: | |
| # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.) | |
| BUILD_TYPE: Release | |
| jobs: | |
| build: | |
| # The CMake configure and build commands are platform agnostic and should work equally well on Windows or Mac. | |
| # You can convert this to a matrix build if you need cross-platform coverage. | |
| # See: https://docs.github.com/en/free-pro-team@latest/actions/learn-github-actions/managing-complex-workflows#using-a-build-matrix | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| MPLBACKEND: Agg # https://github.com/orgs/community/discussions/26434 | |
| strategy: | |
| matrix: | |
| os: [ubuntu-latest, windows-latest] # not building on mac-os because there is no OpenMP | |
| python-version: [3.9, 3.12] | |
| test-env: [test-numpy-1, test-numpy-2] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Configure CMake | |
| # Configure CMake in a 'build' subdirectory. `CMAKE_BUILD_TYPE` is only required if you are using a single-configuration generator such as make. | |
| # See https://cmake.org/cmake/help/latest/variable/CMAKE_BUILD_TYPE.html?highlight=cmake_build_type | |
| run: cmake -B ${{github.workspace}}/build -DCMAKE_INSTALL_PREFIX=${{github.workspace}}/libparallelproj_install -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} | |
| - name: Build C/CUDA libs with CMake | |
| # Build your program with the given configuration | |
| run: cmake --build ${{github.workspace}}/build --config ${{env.BUILD_TYPE}} --target install | |
| - name: Set up PDM | |
| uses: pdm-project/setup-pdm@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Show package version | |
| run: | | |
| pdm show --version | |
| - name: Install dependencies and package | |
| run: | | |
| pdm install -d -G ${{ matrix.test-env }} | |
| - if: matrix.os == 'ubuntu-latest' | |
| name: Run Tests | |
| run: | | |
| pdm run -v pytest tests -v --cov-report term-missing --cov "src/parallelproj" --cov-fail-under=100 | |
| env: | |
| PARALLELPROJ_C_LIB: ${{github.workspace}}/libparallelproj_install/lib/libparallelproj_c.so | |
| - if: matrix.os == 'windows-latest' | |
| name: Run Tests | |
| run: | | |
| pdm run -v pytest tests -v --cov-report term-missing --cov "src/parallelproj" --cov-fail-under=100 | |
| env: | |
| PARALLELPROJ_C_LIB: ${{github.workspace}}\libparallelproj_install\bin\parallelproj_c.dll | |