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AlphaFold v2.2.3

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@Augustin-Zidek Augustin-Zidek released this 25 Aug 10:46
· 71 commits to main since this release

Version v2.2.3 is a bug fix release.

Change log

  • Pin Conda version to 4.13.0 to prevent Docker/Colab setup issues (thanks @Meghpal, @michaelkeith18).
  • Change the Colab PAE json output to new format that matches the format used in the new release of the AlphaFold Protein Structure Database (AFDB). See the AFDB FAQ for a description of the new format.
  • Add a readme file for AFDB.
  • Type hint improvements.
  • Fix tests and improve internal testing infrastructure.
  • Fix Dockerfile breakage due to jax-ml/jax#11142.