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Bump pyglotaran from 0.4.1 to 0.7.1 #63

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@dependabot dependabot bot commented on behalf of github Jul 28, 2023

Bumps pyglotaran from 0.4.1 to 0.7.1.

Release notes

Sourced from pyglotaran's releases.

v0.7.1

pyglotaran 0.7.1 Release Notes

This updated version was used to generate the results for the paper "pyglotaran: a lego-like Python framework for global and target analysis of time resolved spectra" introducing pyglotaran to the broader scientific community.

✨ Features

👌 Minor Improvements:

🩹 Bug fixes

🚧 Maintenance

Full Changelog: glotaran/pyglotaran@v0.7.0...v0.7.1

v0.7.0

pyglotaran 0.7.0 Release Notes

Code name: "Theofelix"

This version was used to generate the results for the paper "pyglotaran: a lego-like Python framework for global and target analysis of time resolved spectra" introducing pyglotaran to the broader scientific community.

💥 BREAKING CHANGE

  • 💥🚧 Dropped support for Python 3.8 and 3.9 and only support 3.10 (#1135)

✨ Features

  • ✨ Add optimization history to result and iteration column to parameter history (#1134)
  • ♻️ Complete refactor of model and parameter packages using attrs (#1135)
  • ♻️ Move index dependent calculation to megacomplexes for speed-up (#1175)
  • ✨ Add PreProcessingPipeline (#1256, #1263)

👌 Minor Improvements:

  • 👌🎨 Wrap model section in result markdown in details tag for notebooks (#1098)
  • 👌 Allow more natural column names in pandas parameters file reading (#1174)
  • ✨ Integrate plugin system into Project (#1229)
  • 👌 Make yaml the default plugin when passing a folder to save_result and load_result (#1230)
  • ✨ Allow usage of subfolders in project API for parameters, models and data (#1232)
  • ✨ Allow import of xarray objects in project API import_data (#1235)
  • 🩹 Add number_of_clps to result and correct degrees_of_freedom calculation (#1249)
  • 👌 Improve Project API data handling (#1257)
  • 🗑️ Deprecate Result.number_of_parameters in favor of Result.number_of_free_parameters (#1262)

... (truncated)

Changelog

Sourced from pyglotaran's changelog.

🚀 0.7.1 (2023-07-28)

✨ Features

  • ✨ Python 3.11 support (#1161)

🩹 Bug fixes

  • 🩹 Fix coherent artifact clp label duplication (#1292)

(changes-0_7_0)=

🚀 0.7.0 (Unreleased)

💥 BREAKING CHANGE

  • 💥🚧 Dropped support for Python 3.8 and 3.9 and only support 3.10 (#1135)

✨ Features

  • ✨ Add optimization history to result and iteration column to parameter history (#1134)
  • ♻️ Complete refactor of model and parameter packages using attrs (#1135)
  • ♻️ Move index dependent calculation to megacomplexes for speed-up (#1175)
  • ✨ Add PreProcessingPipeline (#1256, #1263)

👌 Minor Improvements:

  • 👌🎨 Wrap model section in result markdown in details tag for notebooks (#1098)
  • 👌 Allow more natural column names in pandas parameters file reading (#1174)
  • ✨ Integrate plugin system into Project (#1229)
  • 👌 Make yaml the default plugin when passing a folder to save_result and load_result (#1230)
  • ✨ Allow usage of subfolders in project API for parameters, models and data (#1232)
  • ✨ Allow import of xarray objects in project API import_data (#1235)
  • 🩹 Add number_of_clps to result and correct degrees_of_freedom calculation (#1249)
  • 👌 Improve Project API data handling (#1257)
  • 🗑️ Deprecate Result.number_of_parameters in favor of Result.number_of_free_parameters (#1262)
  • 👌Improve reporting of standard error in case of non_negative constraint in the parameter (#1320)

🩹 Bug fixes

  • 🩹 Fix result data overwritten when using multiple dataset_groups (#1147)
  • 🩹 Fix for normalization issue described in #1157 (multi-gaussian irfs and multiple time ranges (streak))
  • 🩹 Fix for crash described in #1183 when doing an optimization using more than 30 datasets (#1184)
  • 🩹 Fix pretty_format_numerical for negative values (#1192)
  • 🩹 Fix yaml result saving with relative paths (#1199)
  • 🩹 Fix model markdown render for items without label (#1213)
  • 🩹 Fix wrong file loading due to partial filename matching in Project (#1212)
  • 🩹 Fix Project.import_data path resolving for different script and cwd (#1214)
  • 👌 Refine project API (#1240)
  • 🩹📚 Fix search in docs (#1268)

... (truncated)

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Bumps [pyglotaran](https://github.com/glotaran/pyglotaran) from 0.4.1 to 0.7.1.
- [Release notes](https://github.com/glotaran/pyglotaran/releases)
- [Changelog](https://github.com/glotaran/pyglotaran/blob/main/changelog.md)
- [Commits](glotaran/pyglotaran@v0.4.1...v0.7.1)

---
updated-dependencies:
- dependency-name: pyglotaran
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
@dependabot dependabot bot requested review from s-weigand and jsnel as code owners July 28, 2023 16:54
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Jul 28, 2023
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