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github-actions[bot] authored Oct 12, 2024
2 parents 9ff2d7e + 7dde9f0 commit 4347125
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Showing 14 changed files with 14 additions and 14 deletions.
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Expand Up @@ -95,7 +95,7 @@ file:
organelle: nucleus
source: INSDC
source_url_stub: https://www.ncbi.nlm.nih.gov/assembly/
source_date: "2024-10-11"
source_date: "2024-10-12"
identifiers:
assembly_id:
header: genbankAssmAccession
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Expand Up @@ -60,7 +60,7 @@ file:
- TAXON_assembly.types.yaml
source: INSDC
source_url_stub: https://www.ncbi.nlm.nih.gov/assembly/
source_date: "2024-10-11"
source_date: "2024-10-12"
identifiers:
sample_id:
header: biosampleAccession
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2 changes: 1 addition & 1 deletion sources/assembly-data-taxon/cngb_taxon.types.yaml
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Expand Up @@ -20,7 +20,7 @@ file:
header: true
name: cngb.tsv
organelle: nucleus
source_date: "2024-10-11"
source_date: "2024-10-12"
source: CNGB
source_url_stub: https://db.cngb.org/search/assembly/
identifiers:
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Expand Up @@ -467,7 +467,7 @@ file:
organelle: nucleus
source: INSDC
source_url_stub: https://www.ncbi.nlm.nih.gov/assembly/
source_date: "2024-10-11"
source_date: "2024-10-12"
identifiers:
assembly_id:
constraint:
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2 changes: 1 addition & 1 deletion sources/assembly-data/cngb.types.yaml
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Expand Up @@ -17,7 +17,7 @@ file:
organelle: nucleus
source: CNGB
source_url_stub: https://db.cngb.org/search/assembly/
source_date: "2024-10-11"
source_date: "2024-10-12"
taxonomy:
taxon:
header: organismName
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2 changes: 1 addition & 1 deletion sources/assembly-data/ncbi_datasets_eukaryota.types.yaml
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Expand Up @@ -153,7 +153,7 @@ file:
- TAXON_assembly.types.yaml
source: INSDC
source_url_stub: https://www.ncbi.nlm.nih.gov/assembly/
source_date: "2024-10-11"
source_date: "2024-10-12"
identifiers:
assembly_id:
header: genbankAccession
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2 changes: 1 addition & 1 deletion sources/assembly-data/refseq_organelles.types.yaml
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Expand Up @@ -39,7 +39,7 @@ file:
- ATTR_assembly.types.yaml
source: NCBI
source_url_stub: https://www.ncbi.nlm.nih.gov/nuccore/
source_date: "2024-10-11"
source_date: "2024-10-12"
identifiers:
assembly_id:
header: refseqAccession
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2 changes: 1 addition & 1 deletion sources/assembly-data/ucsc_ids.types.yaml
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Expand Up @@ -3,7 +3,7 @@ file:
format: tsv
header: false
name: UCSC_GI.assemblyHubList.tsv.gz
source_date: "2024-10-11"
source_date: "2024-10-12"
identifiers:
assembly_id:
index: 0
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2 changes: 1 addition & 1 deletion sources/btk/btk.types.yaml
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Expand Up @@ -21,7 +21,7 @@ file:
- ATTR_assembly.types.yaml
- ATTR_btk.types.yaml
- TAXON_assembly.types.yaml
source_date: "2024-10-11"
source_date: "2024-10-12"
identifiers:
assembly_alias:
header: alias
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Expand Up @@ -3,7 +3,7 @@ file:
header: true
name: DTOL_Plant_Genome_Size_Estimates.tsv
source: DTOL Plant Genome Estimates Kew
source_date: "2024-10-11"
source_date: "2024-10-12"
attributes:
genome_size:
type: long
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Expand Up @@ -3,7 +3,7 @@ file:
header: true
name: DTOL_assembly_informatics_status_kmer_draft.tsv
source: Darwin Tree of Life Assembly Team
source_date: "2024-10-11"
source_date: "2024-10-12"
source_url: https://qc.tol.sanger.ac.uk/
attributes:
genome_size_kmer:
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2 changes: 1 addition & 1 deletion sources/sra/sra.types.yaml
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Expand Up @@ -24,7 +24,7 @@ file:
name: sra.tsv
needs:
- ATTR_sra.types.yaml
source_date: "2024-10-11"
source_date: "2024-10-12"
taxonomy:
taxon_id:
header: taxon_id
2 changes: 1 addition & 1 deletion sources/tolids/name
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@@ -1,2 +1,2 @@
file:
source_date: "2024-10-11"
source_date: "2024-10-12"
2 changes: 1 addition & 1 deletion sources/tolids/tolids.names.yaml
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Expand Up @@ -4,7 +4,7 @@ file:
name: tolids.tsv.gz
source: dToL sample naming
source_url: https://id.tol.sanger.ac.uk/
source_date: "2024-10-11"
source_date: "2024-10-12"
taxon_names:
tolid_prefix:
index: 0
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