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Obsoleted 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4al…
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…pha-methyl oxidase activity. Fixes #26101
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@raymond91105
raymond91105 committed Sep 13, 2023
1 parent 75396a2 commit decfa53
Showing 1 changed file with 5 additions and 3 deletions.
8 changes: 5 additions & 3 deletions src/ontology/go-edit.obo
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Expand Up @@ -427111,11 +427111,13 @@ is_a: GO:0016709 ! oxidoreductase activity, acting on paired donors, with incorp

[Term]
id: GO:0102189
name: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity
name: obsolete 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity
namespace: molecular_function
def: "Catalysis of the reaction: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + 2 H2O." [EC:1.14.13.-, GOC:pz]
def: "OBSOLETE. Catalysis of the reaction: 4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol + O2 + NADH(2-) + H+ = 4alpha-formyl-5alpha-cholesta-7,24-dien-3beta-ol + NAD(1-) + 2 H2O." [EC:1.14.13.-, GOC:pz]
comment: The term is only defined by a MetaCyc xref, which has been obsoleted.
xref: MetaCyc:RXN-11957
is_a: GO:0016709 ! oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26101" xsd:anyURI
is_obsolete: true

[Term]
id: GO:0102190
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Here's a diff of how these changes impact the classified ontology:

Ontology comparison

Left

  • Ontology IRI: http://purl.obolibrary.org/obo/go.owl
  • Version IRI: http://purl.obolibrary.org/obo/go/releases/2023-09-13/go.owl
  • Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl

Right

  • Ontology IRI: http://purl.obolibrary.org/obo/go.owl
  • Version IRI: http://purl.obolibrary.org/obo/go/releases/2023-09-13/go.owl
  • Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl

Ontology imports

Ontology annotations

4alpha-hydroxymethyl-5alpha-cholesta-7,24-dien-3beta-ol-4alpha-methyl oxidase activity http://purl.obolibrary.org/obo/GO_0102189

Removed

Added

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