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Merge pull request #28403 from geneontology/issue-28385
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Issue 28385
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@sjm41
sjm41 authored Jul 5, 2024
2 parents 0572a14 + 3543a77 commit 7c8f0e1
Showing 1 changed file with 73 additions and 48 deletions.
121 changes: 73 additions & 48 deletions src/ontology/go-edit.obo
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Expand Up @@ -6252,34 +6252,44 @@ def: "Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-
synonym: "inositol polyphosphate multikinase activity" BROAD []
synonym: "inositol trisphosphate 6-kinase activity" BROAD []
synonym: "IpmK" BROAD []
xref: KEGG_REACTION:R05800
xref: EC:2.7.1.151 {source="skos:broadMatch"}
xref: KEGG_REACTION:R05800 {source="skos:exactMatch"}
xref: MetaCyc:2.7.1.151-RXN {source="skos:exactMatch"}
xref: RHEA:17717 {source="skos:exactMatch"}
is_a: GO:0051766 ! inositol trisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28199" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0000824
name: inositol tetrakisphosphate 3-kinase activity
name: inositol-1,4,5,6-tetrakisphosphate 3-kinase activity
namespace: molecular_function
def: "Catalysis of the reaction: ATP + 1D-myo-inositol 1,4,5,6-tetrakisphosphate = ADP + 1D-myo-inositol 1,3,4,5,6-pentakisphosphate." [GOC:elh]
synonym: "1D-myo-inositol-tetrakisphosphate 3-kinase activity" EXACT []
synonym: "EC:2.7.1.151" BROAD []
def: "Catalysis of the reaction: 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+." [RHEA:11856]
synonym: "1D-myo-inositol-tetrakisphosphate 3-kinase activity" BROAD []
synonym: "inositol 1,4,5,6-tetrakisphosphate 3-kinase activity" EXACT []
synonym: "inositol polyphosphate multikinase activity" BROAD []
synonym: "inositol tetrakisphosphate 3-kinase activity" BROAD []
synonym: "IpmK" BROAD []
xref: RHEA:11856
xref: EC:2.7.1.151 {source="skos:broadMatch"}
xref: KEGG_REACTION:R05801 {source="skos:exactMatch"}
xref: MetaCyc:RXN-7162 {source="skos:exactMatch"}
xref: RHEA:11856 {source="skos:exactMatch"}
is_a: GO:0051765 ! inositol tetrakisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0000825
name: inositol tetrakisphosphate 6-kinase activity
name: inositol-1,3,4,5-tetrakisphosphate 6-kinase activity
namespace: molecular_function
def: "Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP." [GOC:elh]
synonym: "1D-myo-inositol-tetrakisphosphate 6-kinase activity" EXACT []
def: "Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+." [MetaCyc:RXN-7184]
synonym: "1D-myo-inositol-tetrakisphosphate 6-kinase activity" BROAD []
synonym: "inositol 1,3,4,5-tetrakisphosphate 6-kinase activity" EXACT []
xref: MetaCyc:RXN-7184
synonym: "inositol tetrakisphosphate 6-kinase activity" BROAD []
xref: EC:2.7.1.151 {source="skos:broadMatch"}
xref: KEGG_REACTION:R10953 {source="skos:exactMatch"}
xref: MetaCyc:RXN-7184 {source="skos:exactMatch"}
is_a: GO:0051765 ! inositol tetrakisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0000826
Expand Down Expand Up @@ -78616,11 +78626,13 @@ synonym: "inositol-trisphosphate 3-kinase activity" BROAD []
synonym: "Ins(1,4,5)P3 3-kinase activity" RELATED [EC:2.7.1.127]
synonym: "IP3 3-kinase activity" NARROW [EC:2.7.1.127]
synonym: "IP3K activity" NARROW [EC:2.7.1.127]
xref: EC:2.7.1.127
xref: KEGG_REACTION:R03433
xref: MetaCyc:2.7.1.127-RXN
xref: RHEA:11020
xref: EC:2.7.1.127 {source="skos:exactMatch"}
xref: EC:2.7.1.151 {source="skos:broadMatch"}
xref: KEGG_REACTION:R03433 {source="skos:exactMatch"}
xref: MetaCyc:2.7.1.127-RXN {source="skos:exactMatch"}
xref: RHEA:11020 {source="skos:exactMatch"}
is_a: GO:0051766 ! inositol trisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0008441
Expand Down Expand Up @@ -187651,14 +187663,16 @@ is_a: GO:0046903 ! secretion

[Term]
id: GO:0032942
name: inositol tetrakisphosphate 2-kinase activity
name: inositol-1,4,5,6-tetrakisphosphate 2-kinase activity
namespace: molecular_function
def: "Catalysis of the reaction: 1D-myo-inositol tetrakisphosphate + ATP = 1D-myo-inositol pentakisphosphate (containing 2-phosphate) + ADP." [GOC:hf]
synonym: "1D-myo-inositol-tetrakisphosphate 2-kinase activity" EXACT []
synonym: "inositol 1,3,4,6-tetrakisphosphate 2-kinase activity" EXACT []
synonym: "inositol-tetrakisphosphate 2-kinase activity" EXACT []
def: "Catalysis of the reaction: 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,2,4,5,6-pentakisphosphate + ADP + H+." [MetaCyc:RXN-7182, PMID:16107538]
synonym: "1D-myo-inositol-tetrakisphosphate 2-kinase activity" BROAD []
synonym: "inositol tetrakisphosphate 2-kinase activity" BROAD []
synonym: "inositol-tetrakisphosphate 2-kinase activity" BROAD []
xref: MetaCyc:RXN-7182 {source="skos:exactMatch"}
is_a: GO:0051765 ! inositol tetrakisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/21631" xsd:anyURI
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0032943
Expand Down Expand Up @@ -288177,35 +288191,41 @@ is_a: GO:0016773 ! phosphotransferase activity, alcohol group as acceptor

[Term]
id: GO:0047325
name: inositol tetrakisphosphate 1-kinase activity
name: inositol-3,4,5,6-tetrakisphosphate 1-kinase activity
namespace: molecular_function
def: "Catalysis of the reaction: 1D-myo-inositol 3,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP." [EC:2.7.1.134, MetaCyc:2.7.1.134-RXN]
def: "Catalysis of the reaction: 1D-myo-inositol 3,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+." [RHEA:12452]
synonym: "1D-myo-inositol-tetrakisphosphate 1-kinase activity" RELATED [EC:2.7.1.134]
synonym: "1D-myo-inositol-trisphosphate 5-kinase activity" RELATED [EC:2.7.1.134]
synonym: "1D-myo-inositol-trisphosphate 6-kinase activity" RELATED [EC:2.7.1.134]
synonym: "ATP:1D-myo-inositol-3,4,5,6-tetrakisphosphate 1-phosphotransferase activity" RELATED [EC:2.7.1.134]
synonym: "inositol 3,4,5,6-tetrakisphosphate 1-kinase activity" EXACT []
synonym: "inositol-tetrakisphosphate 1-kinase activity" BROAD []
synonym: "inositol tetrakisphosphate 1-kinase activity" BROAD []
synonym: "inositol-trisphosphate 5-kinase activity" RELATED [EC:2.7.1.134]
synonym: "inositol-trisphosphate 6-kinase activity" RELATED [EC:2.7.1.134]
xref: EC:2.7.1.134
xref: MetaCyc:2.7.1.134-RXN
xref: RHEA:12452
xref: EC:2.7.1.134 {source="skos:exactMatch"}
xref: KEGG_REACTION:R03479 {source="skos:exactMatch"}
xref: MetaCyc:2.7.1.134-RXN {source="skos:exactMatch"}
xref: RHEA:12452 {source="skos:exactMatch"}
is_a: GO:0051765 ! inositol tetrakisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0047326
name: inositol tetrakisphosphate 5-kinase activity
name: inositol-1,3,4,6-tetrakisphosphate 5-kinase activity
namespace: molecular_function
def: "Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP." [EC:2.7.1.140, MetaCyc:2.7.1.140-RXN]
synonym: "1D-myo-inositol-tetrakisphosphate 5-kinase activity" EXACT []
def: "Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+." [RHEA:12717]
synonym: "1D-myo-inositol-tetrakisphosphate 5-kinase activity" BROAD []
synonym: "ATP:1D-myo-inositol-1,3,4,6-tetrakisphosphate 5-phosphotransferase activity" RELATED [EC:2.7.1.140]
synonym: "inositol 1,3,4,6-tetrakisphosphate 5-kinase activity" EXACT []
synonym: "inositol-tetrakisphosphate 5-kinase activity" EXACT []
xref: EC:2.7.1.140
xref: MetaCyc:2.7.1.140-RXN
xref: RHEA:12717
synonym: "inositol tetrakisphosphate 5-kinase activity" BROAD []
synonym: "inositol-tetrakisphosphate 5-kinase activity" BROAD []
xref: EC:2.7.1.140 {source="skos:broadMatch"}
xref: EC:2.7.1.151 {source="skos:broadMatch"}
xref: KEGG_REACTION:R03478 {source="skos:exactMatch"}
xref: MetaCyc:2.7.1.140-RXN {source="skos:exactMatch"}
xref: RHEA:12717 {source="skos:exactMatch"}
is_a: GO:0051765 ! inositol tetrakisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0047327
Expand Down Expand Up @@ -337741,13 +337761,15 @@ def: "Catalysis of the reaction: 1D-myo-inositol 1,3,4-trisphosphate + ATP = 1D-
synonym: "1D-myo-inositol-trisphosphate 6-kinase activity" BROAD []
synonym: "inositol 1,3,4-trisphosphate 6-kinase activity" EXACT []
synonym: "inositol-trisphosphate 6-kinase activity" BROAD []
synonym: "ins(1,3,4)P(3) 6-kinase activity" RELATED [EC:2.7.1.127]
synonym: "Ins(1,3,4)P3 6-kinase activity" RELATED [EC:2.7.1.127]
synonym: "IP3 6-kinase activity" BROAD [EC:2.7.1.127]
xref: EC:2.7.1.159
xref: MetaCyc:2.7.1.133-RXN
xref: RHEA:20940
synonym: "ins(1,3,4)P(3) 6-kinase activity" RELATED []
synonym: "Ins(1,3,4)P3 6-kinase activity" RELATED []
synonym: "IP3 6-kinase activity" BROAD []
xref: EC:2.7.1.159 {source="skos:broadMatch"}
xref: KEGG_REACTION:R03429 {source="skos:exactMatch"}
xref: MetaCyc:2.7.1.133-RXN {source="skos:exactMatch"}
xref: RHEA:20940 {source="skos:exactMatch"}
is_a: GO:0051766 ! inositol trisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI
created_by: ai
creation_date: 2011-08-16T12:42:59Z

Expand All @@ -337759,13 +337781,14 @@ def: "Catalysis of the reaction: 1D-myo-inositol 1,3,4-trisphosphate + ATP = 1D-
synonym: "1D-myo-inositol-trisphosphate 5-kinase activity" BROAD []
synonym: "inositol 1,3,4-trisphosphate 5-kinase activity" EXACT []
synonym: "inositol-trisphosphate 5-kinase activity" BROAD []
synonym: "ins(1,3,4)P(3) 5-kinase activity" RELATED [EC:2.7.1.127]
synonym: "IP3 5-kinase activity" BROAD [EC:2.7.1.127]
xref: EC:2.7.1.159
xref: KEGG_REACTION:R03428
xref: MetaCyc:2.7.1.139-RXN
xref: RHEA:13253
synonym: "ins(1,3,4)P(3) 5-kinase activity" RELATED []
synonym: "IP3 5-kinase activity" BROAD []
xref: EC:2.7.1.159 {source="skos:broadMatch"}
xref: KEGG_REACTION:R03428 {source="skos:exactMatch"}
xref: MetaCyc:2.7.1.139-RXN {source="skos:exactMatch"}
xref: RHEA:13253 {source="skos:exactMatch"}
is_a: GO:0051766 ! inositol trisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI
created_by: ai
creation_date: 2011-08-16T12:43:11Z

Expand Down Expand Up @@ -435017,11 +435040,13 @@ is_a: GO:0016705 ! oxidoreductase activity, acting on paired donors, with incorp

[Term]
id: GO:0102731
name: D-myo-inositol (1,3,4,6)-tetrakisphosphate 2-kinase activity
name: inositol-1,3,4,6-tetrakisphosphate 2-kinase activity
namespace: molecular_function
def: "Catalysis of the reaction: myo-inositol 1,3,4,6-tetrakisphosphate(8-) + ATP = H+ + 1L-myo-inositol 1,2,3,4,6-pentakisphosphate(10-) + ADP." [EC:2.7.1.-, GOC:pz]
xref: MetaCyc:RXN-7185
is_a: GO:0016773 ! phosphotransferase activity, alcohol group as acceptor
def: "Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ADP + H+." [MetaCyc:RXN-7185, PMID:16107538]
synonym: "D-myo-inositol (1,3,4,6)-tetrakisphosphate 2-kinase activity" EXACT []
xref: MetaCyc:RXN-7185 {source="skos:exactMatch"}
is_a: GO:0051765 ! inositol tetrakisphosphate kinase activity
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28385" xsd:anyURI

[Term]
id: GO:0102732
Expand Down

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